Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1234 |
Symbol | |
ID | 6877207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1200230 |
End bp | 1201591 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642789111 |
Product | nitrogenase molybdenum-cofactor biosynthesis protein NifN |
Protein accession | YP_002219679 |
Protein GI | 198283358 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01285] nitrogenase molybdenum-iron cofactor biosynthesis protein NifN |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00125588 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCG TCATTCAGAG CCGCAAGGCA TGCACGGTCA ACCCCCTCAA AATGAGCCAG CCCATTGGCG GCGCCTTGGC CTTCATGGGC ATTGCCGACT GCATGCCCAT GCTGCATGGT TCCCAAGGCT GTACCGCCTT TGGTCTGGTG CTCTTTCAGC GTCATTTCAA TGAGGGCATT CCCATGCAGA CCACTGCCAT GAGTGAGGTG GCGACAGTCA TGGGCGGCCT GGATCATATC GGTAGTGCCA TCCTCAATAT TCAACAGCGC ACCAAACCGG CCATCATCGG CATCTGTTCC ACCGGCGTCA CCGAAACCAA AGGCGATGAT GTGGATGGTT ATCTCAAGAA CTTTCGTGCC GCCCATCCCG AACTGGACCA GTTAGCTCTG GTTTACGTCT CTACTCCAGA CTTCAAGGAT GCTTTTCAGG ACGGCTGGGC AAAGGCCGTG GAGAGCATGG TAAAAGGGTT GGCTGAACCC AGCAGCGCGC GCCGGGAGGG TTCCGTCAAT TTCCTCGCGG GGTCCCACCT CACCGCCGCG GACATCGAGG AGCTCCGGGA GATCAGTGAA TCCTTCGGGC TGGAGGCGAC CATCCTGCCC GATATTTCCG GATCCATGGA CGGCCACATT CCGGATGACT TCACTCCCAA TACCCTGGGC GGCACTCCAG TGGATGCGAT CCGGCGCATG GGTGAGGCAG AACTGACCAT TGCCCTGGGC GAACAAATGC GTCCTGGGGC AGAAGCCCTG ATGACCAAGA CTGGCCAGCC ATATGTGCTC TTCGATCGCA TTACCGGCAT CGAAACAACG GATCAGTTAT TGGACTGCCT GAGTCAGTTG AGCGGACAGC CGGTACCTGG CAAATATCGT CGCCAACGCA GTCAATTGAT CGACGCCATG CTCGACAGTC ATTTTTTCTT CGGCGGCAAA AAAATCGCCA TTGGCGCCGA ACCTGACCTG CTCTGGAATA TCGGGTCGTG GCTCAACGAA ATGGGGGCGA ACATCACTGC TGCAGTAACC ACCACCCACT CGCCGCTACT CGAACAGATG CCTTGTGAAG AAGTGCTCAT TGGTGATCTG GAGGACCTGG AGGCGCGGAG TGCTGGATGT GACTTACTCA TCACCCACTC CCACGGACGA CAAGCGGCAG CGCGGCTGGA TATCGCTTTC CTGCGCATGG GACTGCCTAT TTTTGACCAG CTCGGCGCCG CCCATCGCCT GTCTCTTGGC TATCGCGGTG CCCGCGATCT GACCTTCGAG ATCGGCAACC TGTTAATGGC ACAGGAAGAA GAAAATCGCC CGGATAGTTG GCCACTAGCC ACGGAGGATC ACGATGCACA TGCGCCGTTT GCGTTTGGTT AA
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Protein sequence | MSTVIQSRKA CTVNPLKMSQ PIGGALAFMG IADCMPMLHG SQGCTAFGLV LFQRHFNEGI PMQTTAMSEV ATVMGGLDHI GSAILNIQQR TKPAIIGICS TGVTETKGDD VDGYLKNFRA AHPELDQLAL VYVSTPDFKD AFQDGWAKAV ESMVKGLAEP SSARREGSVN FLAGSHLTAA DIEELREISE SFGLEATILP DISGSMDGHI PDDFTPNTLG GTPVDAIRRM GEAELTIALG EQMRPGAEAL MTKTGQPYVL FDRITGIETT DQLLDCLSQL SGQPVPGKYR RQRSQLIDAM LDSHFFFGGK KIAIGAEPDL LWNIGSWLNE MGANITAAVT TTHSPLLEQM PCEEVLIGDL EDLEARSAGC DLLITHSHGR QAAARLDIAF LRMGLPIFDQ LGAAHRLSLG YRGARDLTFE IGNLLMAQEE ENRPDSWPLA TEDHDAHAPF AFG
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