Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1214 |
Symbol | |
ID | 6877187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1183438 |
End bp | 1184658 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642789091 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_002219659 |
Protein GI | 198283338 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0101557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000113777 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACCA TGGACGCGAT GGATATACCG GGAAAAATCA CTCCGTCTGA CCTGGCGGGA CGGCAGAAAT CCCGTTGGAT GTTGGCATCG ACGGGGCTCA ATGGCCTGCT CTCCATAGCA AAAATCGGCT GGGGTGTATA CTCCGGCAGC ACCGTCGTCA TCGCCGACGC CGTGCATAGT ATTTCCGACG TATTGGGCGC GTTGCTCATC CTTGCGGCCA TCCGCTTTTC CCGCCACCGC TCCTTGCGGT TTCCGTACGG TCTCCATAAG GTGGAGGACA TGGCTGCCCT GGGCGGTGCC TTGCTGGTCG TCATTGCCGC CTATGAGATC GCCCGCGCGG TATTTTTCTC CGGCGGTGCG CGGCCACCTG ACAATCCCCT GGCCACCATG GGGTTCATGG CGGCCATTCT GGTGGCCGAA GGGATTTTCT ATGTTTTCGA ACGACGCGCC GCCGCCTGCC TCCATTCCCC CGGACTGCAA AGCGATGTGG TCAATTGGCT GGGCGATATC GGCGCGGGGG TAGTGGTCAT CGCCGGAATC GGCGGGCATC TCCTGCGGAT ACCCTTTGCC CAGGAGATTG CCGTCCTCAT CATCCTCTTC CTGATTCTGG AGGGCACCTG GGGGGTGCTG AAAAACGCCA TCCTCTCGCT GCTCGACGCC TCGGTGGAAT CCGAACTGTA CGCAAAGGCG AAAAATCTGC TACTGACCAC GCCGGAAGTG GAAGGCGTGG AAGGATTGCG TCTGCGGCAT GCCGGGAGTG TCCTGTTCGC GGACGCCACC ATCGGTATCG CTGCGGCAAA CTTCGCACAC GCCCATGAAG TAGCCGACCG CGCCCAGCAA CGACTGCAAG AGGCGTTTCC TGAACTGGAA AACATAACGC TTCATTATGA GCCACCCTTC AAGCCATTTA AAAGACGGGC GCTCCTTCTG ACCGAGGAGG GATCGGCGCT GGCTACGCGT TTTGGGATGG CGCAACGTAT TCGTTTCGAG GACGAAAACC GCGAGGGTGT CCTGGTAAAT ACCCAAACCC TGAATAACCC CGTACCTGGC GCTGAAAAAG GGCGCGGCAT ACGGCTGGCG GCATGGCTCA TTGCCCAGGG GGCGGACGAA ATTCACATGC GCGCCGGGCA GTTGGAGCCG GCTCTGGAGG CATTGCTCTC GGCGGCGGGA GTCACATTGG TGATTGACGA GAATCCCCCG CTCCCACCGC ACGCCGAATG A
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Protein sequence | MATMDAMDIP GKITPSDLAG RQKSRWMLAS TGLNGLLSIA KIGWGVYSGS TVVIADAVHS ISDVLGALLI LAAIRFSRHR SLRFPYGLHK VEDMAALGGA LLVVIAAYEI ARAVFFSGGA RPPDNPLATM GFMAAILVAE GIFYVFERRA AACLHSPGLQ SDVVNWLGDI GAGVVVIAGI GGHLLRIPFA QEIAVLIILF LILEGTWGVL KNAILSLLDA SVESELYAKA KNLLLTTPEV EGVEGLRLRH AGSVLFADAT IGIAAANFAH AHEVADRAQQ RLQEAFPELE NITLHYEPPF KPFKRRALLL TEEGSALATR FGMAQRIRFE DENREGVLVN TQTLNNPVPG AEKGRGIRLA AWLIAQGADE IHMRAGQLEP ALEALLSAAG VTLVIDENPP LPPHAE
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