Gene Lferr_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1214 
Symbol 
ID6877187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1183438 
End bp1184658 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content60% 
IMG OID642789091 
Productcation diffusion facilitator family transporter 
Protein accessionYP_002219659 
Protein GI198283338 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000113777 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCA TGGACGCGAT GGATATACCG GGAAAAATCA CTCCGTCTGA CCTGGCGGGA 
CGGCAGAAAT CCCGTTGGAT GTTGGCATCG ACGGGGCTCA ATGGCCTGCT CTCCATAGCA
AAAATCGGCT GGGGTGTATA CTCCGGCAGC ACCGTCGTCA TCGCCGACGC CGTGCATAGT
ATTTCCGACG TATTGGGCGC GTTGCTCATC CTTGCGGCCA TCCGCTTTTC CCGCCACCGC
TCCTTGCGGT TTCCGTACGG TCTCCATAAG GTGGAGGACA TGGCTGCCCT GGGCGGTGCC
TTGCTGGTCG TCATTGCCGC CTATGAGATC GCCCGCGCGG TATTTTTCTC CGGCGGTGCG
CGGCCACCTG ACAATCCCCT GGCCACCATG GGGTTCATGG CGGCCATTCT GGTGGCCGAA
GGGATTTTCT ATGTTTTCGA ACGACGCGCC GCCGCCTGCC TCCATTCCCC CGGACTGCAA
AGCGATGTGG TCAATTGGCT GGGCGATATC GGCGCGGGGG TAGTGGTCAT CGCCGGAATC
GGCGGGCATC TCCTGCGGAT ACCCTTTGCC CAGGAGATTG CCGTCCTCAT CATCCTCTTC
CTGATTCTGG AGGGCACCTG GGGGGTGCTG AAAAACGCCA TCCTCTCGCT GCTCGACGCC
TCGGTGGAAT CCGAACTGTA CGCAAAGGCG AAAAATCTGC TACTGACCAC GCCGGAAGTG
GAAGGCGTGG AAGGATTGCG TCTGCGGCAT GCCGGGAGTG TCCTGTTCGC GGACGCCACC
ATCGGTATCG CTGCGGCAAA CTTCGCACAC GCCCATGAAG TAGCCGACCG CGCCCAGCAA
CGACTGCAAG AGGCGTTTCC TGAACTGGAA AACATAACGC TTCATTATGA GCCACCCTTC
AAGCCATTTA AAAGACGGGC GCTCCTTCTG ACCGAGGAGG GATCGGCGCT GGCTACGCGT
TTTGGGATGG CGCAACGTAT TCGTTTCGAG GACGAAAACC GCGAGGGTGT CCTGGTAAAT
ACCCAAACCC TGAATAACCC CGTACCTGGC GCTGAAAAAG GGCGCGGCAT ACGGCTGGCG
GCATGGCTCA TTGCCCAGGG GGCGGACGAA ATTCACATGC GCGCCGGGCA GTTGGAGCCG
GCTCTGGAGG CATTGCTCTC GGCGGCGGGA GTCACATTGG TGATTGACGA GAATCCCCCG
CTCCCACCGC ACGCCGAATG A
 
Protein sequence
MATMDAMDIP GKITPSDLAG RQKSRWMLAS TGLNGLLSIA KIGWGVYSGS TVVIADAVHS 
ISDVLGALLI LAAIRFSRHR SLRFPYGLHK VEDMAALGGA LLVVIAAYEI ARAVFFSGGA
RPPDNPLATM GFMAAILVAE GIFYVFERRA AACLHSPGLQ SDVVNWLGDI GAGVVVIAGI
GGHLLRIPFA QEIAVLIILF LILEGTWGVL KNAILSLLDA SVESELYAKA KNLLLTTPEV
EGVEGLRLRH AGSVLFADAT IGIAAANFAH AHEVADRAQQ RLQEAFPELE NITLHYEPPF
KPFKRRALLL TEEGSALATR FGMAQRIRFE DENREGVLVN TQTLNNPVPG AEKGRGIRLA
AWLIAQGADE IHMRAGQLEP ALEALLSAAG VTLVIDENPP LPPHAE