Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1213 |
Symbol | |
ID | 6877186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1182393 |
End bp | 1183376 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642789090 |
Product | transport system permease protein |
Protein accession | YP_002219658 |
Protein GI | 198283337 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0536991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000935619 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCATTGC TGCTCGTGCT CCTGGCCGGC ATGGTCTTGC TGGAGATGTC CTGGGGACAT TACCCGCTGT CCTGGCTGCA ATTCTGGCAA TGGCTGCGGG GCAGCCCACT GTTATCGCCG GATAAAGCCG TGCAGATCCA TTTGTTGATG GTGGAGATCC GCCTGCCGCG CCTCTCTGTG GCGATCCTTG TGGGCGCGGC GCTGGCGGCC AGTGGCACCG TCTTTCAGGC CGTGTTCCGC AACCCGCTGG CGGCTCCGGA TATTCTGGGC GTCATGGCAG GATCAGCCTT CGGGGGAGCC TTGGGCATCA TCCTGGGCGG ACCCTGGTGG ACGATACAGG TGGCCGCCTT TATTTTTGGG CTGATCGCCG TGGCGATGGC TTACCTGATC GCCCGTCATT TTCCCGGGCA GCCTACTCTG ATGCTGGTGA TTGGCGGTAT TCTGGCCGGA GCCTTGTTTA CCGCACTGCT TTCACTGGTG AAATATGCCG CCGATCCGTA CCAGCAGCTA CCCAGTATCG TTTTCTGGTT GATGGGCAGT CTTTCCAACG TGCCCCTGCG CCAGATTCCC TACTTTGCCC TGCCGGTTTT TATCGGGATC AGCCTGTTGA TATTACAGGG TCATCGTCTC GATGCCCTGA GTCTGGGGGA CGAAGAAGCG CATAGTCTTG GTCTGCCAGT GCGCCAGATT CGTTTGCTGG TCATCGTGCT CGCGACACTG CTGGCAGCTA TGGCCGTGAT GATGGCGGGG ATGATCGGCT GGATCGGGCT GATCATCCCC CATCTGGGAC GTCTGATGCT CGGACCGGGC AACCGCCGTC TGTTGCTGGG GAGCAGTATT CTCGGTGCCG CATACCTTTT GCTCGCGGAC GCCCTGGCCC GCAACCTGTT CTCCGTGGAT GTTCCGGTGG GCGTATTTGC GGAACTTCTG GGGGTGCCGG CGTTTTTACT GGTGCTCCGG CAGATACGGA AGGCGTGGGT CTAG
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Protein sequence | MPLLLVLLAG MVLLEMSWGH YPLSWLQFWQ WLRGSPLLSP DKAVQIHLLM VEIRLPRLSV AILVGAALAA SGTVFQAVFR NPLAAPDILG VMAGSAFGGA LGIILGGPWW TIQVAAFIFG LIAVAMAYLI ARHFPGQPTL MLVIGGILAG ALFTALLSLV KYAADPYQQL PSIVFWLMGS LSNVPLRQIP YFALPVFIGI SLLILQGHRL DALSLGDEEA HSLGLPVRQI RLLVIVLATL LAAMAVMMAG MIGWIGLIIP HLGRLMLGPG NRRLLLGSSI LGAAYLLLAD ALARNLFSVD VPVGVFAELL GVPAFLLVLR QIRKAWV
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