| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1196 |
|---|
| Symbol | |
|---|
| ID | 6877169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1166017 |
|---|
| End bp | 1166859 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642789073 |
|---|
| Product | Electron transfer flavoprotein alpha/beta-subunit |
|---|
| Protein accession | YP_002219641 |
|---|
| Protein GI | 198283320 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00317392 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACATTG TCGTCTGTAT CAAACAGGTT CCCGACAGCG CCCAGATCCG GGTGCATCCG
GTCACCAACA CCATCATGCG GCAGGGTGTA CCCGCCATCA TCAACCCCTT CGACGTTTTT
GCCATCGAAG AGGCCTTGCG CCTCAAGGAC CGCTTCGGTG GACGAGTCAC CGTGCTGACC
ATGGGGCCGC CCCAAGCGGA AGACGCACTG CGCAAGGCCA TCGCCTATGG TGCCGACGAC
GTGATACTCC TGACCGACCG CGCCTTCGCC GGTGCCGACA CCCTGGCAAC CTCCTTTGCC
CTGGCACAGA CCATCCGCAA AATTGGTGAG GAACATCCCG TAGATCTGGT GTTTACAGGC
AAGCAGACCA TTGACGGCGA TACCGCACAG GTCGGACCTG GCGTTGCCAG GCGCCTGGGC
CTGCAACTCC TCACCTATGT TTCCGCGATC GATACGCTGG ACCTTGCGGA ACGCAGCATT
ACCGTACGGC GCCGTTCCGA AGGTGGTGTA CAGGTGATCC GGACCCGCCT GCCCGCCCTG
ATCACCATGC TGGAGGGTAG CAACCAGATC CGCTTCGCCG GCATGGATGA TATGTTTCGC
TCGGCCCGCT TTGAGGTGCC GAAATGGAAT AAAGAGCGCG CCGGCATTGA GGATGTCAGC
AAAATCGGCC TCAAGGGCTC GCCCACGGTG GTCAGCAAGA TATTCACCCC CAAGCCCCGG
GCGGTGAAGG CACAGATGAT CGGCGCCGAT CTGGACGCCG ACGGCACCGC CAACGCCATC
CTGGATATTC TCAGCAGCCA GCACCCGCGC CTGGCGCAGG AACTCGGCCT GATCACCCCA
TAA
|
|---|
| Protein sequence | MHIVVCIKQV PDSAQIRVHP VTNTIMRQGV PAIINPFDVF AIEEALRLKD RFGGRVTVLT
MGPPQAEDAL RKAIAYGADD VILLTDRAFA GADTLATSFA LAQTIRKIGE EHPVDLVFTG
KQTIDGDTAQ VGPGVARRLG LQLLTYVSAI DTLDLAERSI TVRRRSEGGV QVIRTRLPAL
ITMLEGSNQI RFAGMDDMFR SARFEVPKWN KERAGIEDVS KIGLKGSPTV VSKIFTPKPR
AVKAQMIGAD LDADGTANAI LDILSSQHPR LAQELGLITP
|
|---|
| |