Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1173 |
Symbol | |
ID | 6877146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1143444 |
End bp | 1144385 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789050 |
Product | oxidoreductase domain protein |
Protein accession | YP_002219618 |
Protein GI | 198283297 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0559486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATA TGAGAACCGG GGTCATCGGG GTGGGCCACT TGGGGCGCTT TCACGCGCAG AAATATGCCG CAATCTCACA ACTGGCGGGG GTTTTTGACG AGAACGCGGA ACGGGCCGCA GAGGTTGCCG CCGAATTGAG GTGCCGTGCT TTCCCCAGCG TTGATGCGTT ACTGGCTGAA GTAGACGCGG TGTCCATTGT CACCCCCACC TCCACCCACT TCGCGGTAGC GGAAGTGGCG ATGCAGGCGG GAGTACATTG TTTGATCGAA AAACCCTTTA CCCTGGATAC CGAAGAAGCG GATGCCCTGA TTGGTATGGC GCAGGAGCGC CATCTGGTGC TGGCGATTGG TCATATCAAG CGGGTACACC CGGCCATTCA GTATTTGCGG CAGGCGGGCT TTGGTGCGCC CCGCTACCTG GAGGCGGAGC GTCTGGCGCC GTTCAAGCCA CGCTCGCTGG ATATCGACGT GATCATGGAT CTGATGATCC ATGATCTGGA CCTGACCTTG CTGCTGACCG GCGCCGAACC CGTGGACGTG CGTGCCGTGG GTGTCGCGGC GGTAACGGAC AAGGCGGACA TGGCCACGGC CTGGATGACC CTGAACAACG GCACCGTGGC CAACCTGGCA GCCTCCCGGG TAGTGCGGGA ACCTGCGCGG CGCATGCGTA TCTTTTGGCA GGATCGTTAT GCTTCGGTGG ATTTCCTCAA CAACACCCTG CACATCTACC ATCGCGGTGC GGGAACGGTG CCGGGAATTC CCGGTGTACG TGATGAGGCT GTGGACCTGG CCAAACGCGA TGCCTTGGCG GCGGAGATCG AGGATTTCCT GAACGCCATC GCAGCGCACC GGCCGGTGTT TTGCGACGGC GTCGCGGGTC GGCGGGTGCT GGCCGCGGCG CTGCAGGTGC GGGTAGCCGT GGAGGCTTTT CTGCAGCGTT GA
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Protein sequence | MIHMRTGVIG VGHLGRFHAQ KYAAISQLAG VFDENAERAA EVAAELRCRA FPSVDALLAE VDAVSIVTPT STHFAVAEVA MQAGVHCLIE KPFTLDTEEA DALIGMAQER HLVLAIGHIK RVHPAIQYLR QAGFGAPRYL EAERLAPFKP RSLDIDVIMD LMIHDLDLTL LLTGAEPVDV RAVGVAAVTD KADMATAWMT LNNGTVANLA ASRVVREPAR RMRIFWQDRY ASVDFLNNTL HIYHRGAGTV PGIPGVRDEA VDLAKRDALA AEIEDFLNAI AAHRPVFCDG VAGRRVLAAA LQVRVAVEAF LQR
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