Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1162 |
Symbol | |
ID | 6877135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1132880 |
End bp | 1133605 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789039 |
Product | uridylate kinase |
Protein accession | YP_002219607 |
Protein GI | 198283286 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0528] Uridylate kinase |
TIGRFAM ID | [TIGR02075] uridylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.899352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGCGC CCTTGTATTC CCGTATTCTC CTCAAGCTTA GCGGCGAGGC GCTCATGGGC GATGGTCAGT ACGGTGTGGA CCGTGAGGTC GTACAGCGTA TAGCCAGGGA AATCAAGGAT GTCTCCGACA CCGGAGTACA GATCGCCATC GTGATCGGTG GCGGTAATAT TTTCCGGGGT ATGGCCAAGG CGGCCGAAGG CATGGATCGC GCCACCGCCG ACTATATGGG TATGCTGGCG ACGGTCATGA ATGCCCTCGC CGTGCAGGAT GCCCTGGAGC ACCTCGGTCT GCCGACCCGG GTGCTGTCGG CGCTGCATAT CGAACAGGTC GCGGAGCCTT ATATCCGGCG GCGTGCTATC CGCCATCTGG AAAAGGGACG GGTGGTCATC TTCGGCGCTG GTACCGGGAA TCCCTTTTTT ACCACCGATA CGGCGGCCAG CCTGCGCGCG GTGGAAATCA ATGCCGAACT AGTGCTTAAG GGGACCAAGG TAGACGGTGT TTACACAGAC GACCCCGTCA GCCACCCCGA GGCCATGCGC TACCGGGAAC TGTCCTATAG CCAGGTATTG GAGCAGAACT TACAGGTTAT GGATGCGACG GCTATCACCC TCTGCCGCGA TAATGACATG CCGATCATCG TTTTTTCCAT CAACAAATCC GGCGCATTGA TGCGGGTGAT GCTGGGTGAA GAGGAAGGCA CTTCCGTGCG CAGAGAGATT GCATGA
|
Protein sequence | MAAPLYSRIL LKLSGEALMG DGQYGVDREV VQRIAREIKD VSDTGVQIAI VIGGGNIFRG MAKAAEGMDR ATADYMGMLA TVMNALAVQD ALEHLGLPTR VLSALHIEQV AEPYIRRRAI RHLEKGRVVI FGAGTGNPFF TTDTAASLRA VEINAELVLK GTKVDGVYTD DPVSHPEAMR YRELSYSQVL EQNLQVMDAT AITLCRDNDM PIIVFSINKS GALMRVMLGE EEGTSVRREI A
|
| |