Gene Lferr_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1065 
Symbol 
ID6877036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1040496 
End bp1040960 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID642788945 
Producthypothetical protein 
Protein accessionYP_002219514 
Protein GI198283193 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TTACGGTATT GCAGTTTTTC CATATCACCG CAGTGGTTTC CTGGATTGGA 
GGAATTTTTC TGCTCGATAT TTTTATCGTT CCGGTTCTGC GCCGTAACAT AGCCAGCGAG
GCAGAACGCA GCAAATTACT CTACCAGATT TTTCGCCCCT TCTTTGCCTG GGTATGGGTG
GCTGGCGCGG TACTGGTGAT TACCGGTTAC TGGATGGTGT ACGTATACGG CGGATTTACC
GCGCTCCCTA CGGCGATGCG GATCATGGTG ACACTCGGCA CCCTGATGGT GATGCTGGCC
TTGCTTGTAT TCTTCGTGCC GTTCCTGCGC ATGGGGCGGG CCATTGCCGC TGGCGACTGG
CCTATGGCCG CCCGGGCCGC CGGGCAGATC AGGCTGGTTT CGGGTATCAA TCTGGCGCTG
GCCATCCCCA CCATCCTGGC GGGAGTATGG GGAATATTTG GCTGA
 
Protein sequence
MSALTVLQFF HITAVVSWIG GIFLLDIFIV PVLRRNIASE AERSKLLYQI FRPFFAWVWV 
AGAVLVITGY WMVYVYGGFT ALPTAMRIMV TLGTLMVMLA LLVFFVPFLR MGRAIAAGDW
PMAARAAGQI RLVSGINLAL AIPTILAGVW GIFG