| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1020 |
|---|
| Symbol | |
|---|
| ID | 6876989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 988957 |
|---|
| End bp | 990054 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788898 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_002219469 |
|---|
| Protein GI | 198283148 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.874382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000413694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTGCAATA GCTATCTGGA ATATACGGCG GCGGGTGTGT CCGATCTGCG TCCCTATCAG
CCGGGCAAAC CCTTGGCGGA ACTGGAACGG GAACTGGGTA TCCGTGACGC CATCAAGCTG
GCCTCCAATG AAAATCCGTT AGGTCCGAGC CCTCTGGCGC TGGCAGCCGT CCGCGAGGTG
TTGCCCGCCC TGGCGCAGTA CCCCGAAGGG TCGGCTCCGG AGTTGCGCGC GCTGCTGGCC
CGTCAGCTCG ATCTGGACCC TGGGCAATTT ATTTTCGGCA ACGGTTCTGA TCAGGTGGTG
GAGCTTGCGG TGCGTGCCCT TGCCGGGCCG GGTACGGAGG TGATTGTCTC GCAGTATGCC
TTTGCCGCCT ATGCCATTGC CGCGCAGGCC AGTGGTGCGA CTGTACGGGT CGCCCCGGCG
CGGGATTACG GTCATGACCT GGATGCCATG GCCAGTCTGC TCAACGCCAA TACCCGGCTG
GTTTTTATCG CCAATCCCAA TAATCCCACG GGTACGTATC TTACGGCGGA CGCCCTGGAG
ACCTTTATCG ACAGCGTGCC TTCCCATGCG CTGGTGGTGC TGGACGAAGC CTACCTGGAA
CTGATGGACG CGGCGGATTA TCCGGATGGC AGACGGTGGC TGCGGCGTTT CGGTAACCTG
ATGCTTACCC GTACGTTTTC CAAGGCCTAT GGGCTGGCGG GTCTGCGTTG CGGTTACGGC
ATCGGCCACC CCGACCTGAT GGCGGTGCTG GAGCGGGTTC GTCAGCCCTT CAACGTCAAT
ACGCTGGCGC AGGTGGCGGC GCATGCCGCG CTTACGGATC GCGCCCATCT GCAGGCCACC
CTGGCCAACA ACCGTCAGGG GATCGTGGCC CTCCGCGATG GATTGTGCAA TCTTGGATTG
ACAATTCTGC CGCCTGCAGG CAACTTTACC GCCTTCGCCG TGCCGGGAGG TGGACAGCGC
GTCTATGAGG CCCTGCTGCT TCGGGGGGTG ATCGTCCGGC CGCTTACCCC TTACGGCATG
CCGGATCATC TGCGGGTCAG TGTTGGCCTG CCGGTGGAAA ACCAACGTTT TCTTACAATG
CTGGGCGAGG TCCTGTAA
|
|---|
| Protein sequence | MCNSYLEYTA AGVSDLRPYQ PGKPLAELER ELGIRDAIKL ASNENPLGPS PLALAAVREV
LPALAQYPEG SAPELRALLA RQLDLDPGQF IFGNGSDQVV ELAVRALAGP GTEVIVSQYA
FAAYAIAAQA SGATVRVAPA RDYGHDLDAM ASLLNANTRL VFIANPNNPT GTYLTADALE
TFIDSVPSHA LVVLDEAYLE LMDAADYPDG RRWLRRFGNL MLTRTFSKAY GLAGLRCGYG
IGHPDLMAVL ERVRQPFNVN TLAQVAAHAA LTDRAHLQAT LANNRQGIVA LRDGLCNLGL
TILPPAGNFT AFAVPGGGQR VYEALLLRGV IVRPLTPYGM PDHLRVSVGL PVENQRFLTM
LGEVL
|
|---|
| |