| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1019 |
|---|
| Symbol | |
|---|
| ID | 6876988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 987879 |
|---|
| End bp | 988955 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642788897 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_002219468 |
|---|
| Protein GI | 198283147 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01801] chorismate mutase domain of gram positive AroA protein
[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.789998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000373166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC CGGAACTGGC GGCCCTGCGT AAGGCCATCG ATCAGGTGGA TCAGCAGTTC
CTGCAACTGC TCGGCGAGCG GGGCCGGCTT GCGCAGCAGG TGGGTGCCGT CAAACAGGCT
GCGGGCGAAG TGAATTTTTA CCATCCAGAC CGTGAGTCGG AGATTCTCCG TCGGGTCATG
GCCGATAACC CTGGGCCCTT TTCCAGTGAA CAGGTTGCCA TCATTTTCCG GGAGATCATC
TCTGCAGGCC TGGCCCTGGA GCAACCCCTG CAAGTGGCCT ATCTTGGACC CGCCGGCACG
TTTTCGCAGA TCGCGGCGCA GAAGCATTTC GGGCGCGCGG CCGTTCTGCA GCCCACCGCG
GGGATCGCCG AGATTTTCCG CCTGGTGGAC AGTGACCAGG CCCGGTTCGG TGTGGTGCCG
GTGGAGAACA GCACTGAAGG TTCCGTCAAT CTCAGTCTGG ATCTGCTCCT GGATTACCCC
TTGCAGATCT GCGGCGAGGT CCAGTTACGC ATCGTCCATA ATCTGGTGGC CAAGGTGCCC
ATCTCCACCG TTCGCCGTGT CTACGTTCAT TATCAGACCA GGGCCCAGTG CCGTCAGTGG
CTCGCGACCC ATTTGCCGCA GGCGGAATTG GTGGATGTGG CCAGCAACGC GGTTGCCGCG
GAACGGGCTG CGACAGATGC CGATGGCAGC GCCATTTCCA CGACCCTCGC CGCGGAAGCG
TACGGCCTCG ACATTCTGGT CGCGGGGATC GAAGACAACC CGGAGAACAC CACCCGTTTT
CTGATCATTG GCAAAATCCA TACGCGACCT ACGGGGAATG ACAAGACCAG CCTGGTGGTA
GCCGGCGCCA ATCGTCCGGG GAGTCTGCAT GCGTTGCTGT CACCGCTGGC CGACGCGGGC
ATCAGTCTGA CGCGCATCGA GTCACGGCCG GCACGCTCGG CCATCTGGGA GTACGTCTTT
TATCTCGACT TGCTTGGCCA TTGTCAGGAT GCCGCCATCG CTCCGGTGCT GGATGTTCTC
GCGCAACAGG CATCCTTTTG CCGTTGTCTC GGCAGTTATC CCCGGGCGGT ATTTTGA
|
|---|
| Protein sequence | MKNPELAALR KAIDQVDQQF LQLLGERGRL AQQVGAVKQA AGEVNFYHPD RESEILRRVM
ADNPGPFSSE QVAIIFREII SAGLALEQPL QVAYLGPAGT FSQIAAQKHF GRAAVLQPTA
GIAEIFRLVD SDQARFGVVP VENSTEGSVN LSLDLLLDYP LQICGEVQLR IVHNLVAKVP
ISTVRRVYVH YQTRAQCRQW LATHLPQAEL VDVASNAVAA ERAATDADGS AISTTLAAEA
YGLDILVAGI EDNPENTTRF LIIGKIHTRP TGNDKTSLVV AGANRPGSLH ALLSPLADAG
ISLTRIESRP ARSAIWEYVF YLDLLGHCQD AAIAPVLDVL AQQASFCRCL GSYPRAVF
|
|---|
| |