| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0984 |
|---|
| Symbol | |
|---|
| ID | 6876952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 958329 |
|---|
| End bp | 959321 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642788865 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding domain protein |
|---|
| Protein accession | YP_002219437 |
|---|
| Protein GI | 198283116 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00386753 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTA TGGAATATGA AATCTGTCTG GAGCCATCCG GCATCCGTTT TATGGCGGAT
GAGCACCAAA ACATTGTCGA AGCGGCGAAA CAACACGGAA TTTCCATCAA ACATGGCTGT
GCCAGTGGTT CCTGTGGTGA TTGCAAGGGC ACCATTTTGT CCGGCGCCAG CGAACAGGGG
CCTTTTATGC CGCTGCTGCT CTTACCCACG GAACGTGCCG CTGGCATGGC CATTCTCTGT
AAACTGTATC CACGTAGTGA CCTGCGTTTG CATGCCGAAG TAGTTCGGAA AGATACCTGG
AAGACCGAGA TTACCCAGCT CACACCACTG GCCTGGAATG TGCTGGAGTT ACGGCTGCGG
CCGGAACGGC CTTACCCCTA CCGAACCGGG CAATACGCCC GCATCGCGAT ACCGGGGCGT
CCAGACCAGT GGCGTTCCTA TTCCATGGCG ACGCCGCCGG GTACCACCGG AGAACTGGTT
TTCCATATCC GTGAATTACC CGGCGGCATA TTCAGCCAGT GGCTTTTTCA TACCGCACAA
AGGGGCGATG CATTAATTCT GGGCGCTGCA CAGGGCGAAT TCGCACTAAG CCCGGACAAT
GACCGTGATA TGCTCTGTAT TGCCGCCGGA ACCGGTCTGG CCCCCATTGA GGCGATGATC
CAGGAAAGTA TCGCCTTGGG ACGGACCCGG CCTATCCATC TTTTTTACGG CGCCAGGAAA
CGGGCCGACT TTTATCATCT GGAAGAACTC ACCAGATGGT CACAACAATA TCCGCACATC
ACCATCACAT CGACACTTTC CGACAGGCAG GATGCCTCTT GGACCGGCGC CCACCGGCTC
CTGCCCACGG TTGCCGCCAG CGGCCACTGG AAGGATCATG AAGTATATTT GTGCGGTAGC
CCCGGCATGA TAGAAGCCGC CATCGACCTG CTGCTCTCCC ATGACGTGCG GCATGACCAT
ATTCACTTCG ATGCTTTTGC ACCTAATGGA TGA
|
|---|
| Protein sequence | MPVMEYEICL EPSGIRFMAD EHQNIVEAAK QHGISIKHGC ASGSCGDCKG TILSGASEQG
PFMPLLLLPT ERAAGMAILC KLYPRSDLRL HAEVVRKDTW KTEITQLTPL AWNVLELRLR
PERPYPYRTG QYARIAIPGR PDQWRSYSMA TPPGTTGELV FHIRELPGGI FSQWLFHTAQ
RGDALILGAA QGEFALSPDN DRDMLCIAAG TGLAPIEAMI QESIALGRTR PIHLFYGARK
RADFYHLEEL TRWSQQYPHI TITSTLSDRQ DASWTGAHRL LPTVAASGHW KDHEVYLCGS
PGMIEAAIDL LLSHDVRHDH IHFDAFAPNG
|
|---|
| |