Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0941 |
Symbol | |
ID | 6876906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 903061 |
End bp | 905415 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642788821 |
Product | hypothetical protein |
Protein accession | YP_002219396 |
Protein GI | 198283075 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGAAAA ACCGCGTTTT CATCATTGCA ACATGGCTGG CTATTTTGCT TGTCGGTAGC GTATTGATCA GCACCACCAA ATTCACAGCA AATCTTTCGG AATTCCTGCC TCGGTCACCC ACCACGCAGC AGGCGGTCCT GAACGAACAA CTACGTCAGG GTATTCTATC ACGCCAAATC ATGATCCGCA TTGATGGCGG TGATGCTACC ATACGCGCCA AGCTCTCCAA TGAGCTGGTC CGGAAGCTTC AGGGTAACAC TGCATTTTTG TCCATCAACA ACGGCAGCAA CAATGGTGAT ACCAGAATAT TTCATTATAT TTTTTCTCAT CGTTATTTGT TGAGCCCCAC CGTCAACCCG ACACTTTTTA CAGTTGCCGG GCTACACGAC GCCATTGCCG ATTCCATCGA TATGTTGGCC ACTCCAGGCG GAGAGATGGT TCAGTCGTTG CTCCCTAGTG ATCCTACCGG GGCCACTGTG CAGATGATCC AGTCCATGGG AAGCGGGGTG AGACCAGTGA CCCGCGACGG AGTGTGGTCC TCGCGTTCCG GCAAAAGTGC CTTGATATTG GCACAAACCC GAGCTTCCGG TTCCGCTATA AATGCCCAGC AGGCAGCAAT CAACGACATA CAGACCGCAT TCGCCGTTGC GAAGTCGGAA GCGGGGTCCG TAGCCGCGAA CACTACCTTG ATGATGACCG GCGTCGGGGT GATTTCGGTG GCCTCTCGCG ACGCCATCGT CCATGCAGCG GAGTTGATGT CCACCATCAG TATAACGCTT ATAATTTTAC TGCTATTGCT CGTATACCGC TCCGGTATCG TGCTTATTCT GGGTCTCATA CCCGTATTTT CCGGAGTAAT CGTCGGAATT TCCGCAGTAG CGCTTGGTTT CTCTGTTGTC TACGATATCA CTCTGGGATT TGGAACGGCA TTAATTGGCG AAGCCGTAGA TTATTCCATT TATTTTTTTG TGCAGTCCGG ACAATCTGCA ACAGGAAGTG ACGAATGGAT ACGCAAGTAC TGGCCGACCA TCAGATTAGG GGTATTCACC TCGATCATCG GATTTGCCAG TCTGCTTTTT TCGAATTTGC CGGGGCTGGC ACAACTCGGC CTTTATGCGA TTGCCGGGCT TCTCACTGCG GCAATTGTTA CCCGGCTGGT ATTACCAACC CTGCTGCCCG GCAATTTTAA ATCACGGGAT TTAAGCAGTA TTGGCGAACA TCTGCTTCGC TTGACACGAA CCCTTTCCGC CCTGCGGCCT GGCGTCGTGT TGCTACTGAT CGCGGCGAGC GCCGTCCTCG TCAGCCATCG CGACAAGATT TGGAACTACG ACCTGTCTGC GCTGAGCCCC GTTCCGGCGG CAGCACAACG ACTCTATACG CAAATGCGTG CTGACCTGGG TGTATCCGAG GGCGGTTATC TGGTCGTCGT TTCTGCACCC ACCGTCAACG CTACGTTGGC TGTGGCCGAA AAGACCGGCA ATGCGCTACA GGGGTTGGTA GAAAATCACG TCATTGCCGG CTATGAGAGT CCCGCCCGGT ACCTGCCGAG CGTCACATTG CAACAGGAGC GGCAAGCGGC GATCCCACCA AAAGACGTGC TGGAAAGGCG TTTGCGTGAA GCCCTGCTTG GTCTACCGGT AAAAGCTTCG CTGTTCACGC CGTTCATCAA GGAATCCGAG GCGCAGCGCA CGCTCACCCC CTTAACCCTT GCCGACCTGC GCGGCACCAG TATCGGGATG GTGGTAAACA GCATGCTTAT CCGCCACGGC AACGGATGGG ACGCCATTCT ACCGCTCAAA GCACCGGCTT CAGGCACGGT GGACGCGCGG CGCGTGCGTG CCAGCCTTGC CCGGCACCAT ATCACGGGTG CCATGCTCAT CGACTTGTCC GGAACATCGA ATCAATTGTA TAAAAGTTAT CTGATAAATG GGATTAAGCT GTCATTATCC GGTGTCGCTT TCATTGCCTT GCTGTTATTG TTCGTATTGC GCTCCCCGGT GCGCGTCTTC AGGATACTGC TACCGTTGAT TGCGGCCGTC CTGACCGTAA CCGCCGGACT TGTCTTGCTC GGCTACGAAC TAAATATTAT GAATCTGATC GGGCTGATGC TGATTGTCGC CATCGGATCA AACTACGCAC TCTTTTTTGA CCAGGGCGCC CGGCAGGTCC ACGGGGAGAT CGCGCCGCGT ACGCTCGCTT CTCTGGTCAT CGCCAACATC ACCACCATCA TGGGATTTGG GCCACTCGCT TTTTCCGGAG TTCCAGTACT GCAGGCCATC GGTGCCGCCG TCGCGCCGGG CGTTGTTCTG GCGTTGTTAT TCTCTGCCAG TTTTTCCCAA CAGTCGACCG TTTGA
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Protein sequence | MRKNRVFIIA TWLAILLVGS VLISTTKFTA NLSEFLPRSP TTQQAVLNEQ LRQGILSRQI MIRIDGGDAT IRAKLSNELV RKLQGNTAFL SINNGSNNGD TRIFHYIFSH RYLLSPTVNP TLFTVAGLHD AIADSIDMLA TPGGEMVQSL LPSDPTGATV QMIQSMGSGV RPVTRDGVWS SRSGKSALIL AQTRASGSAI NAQQAAINDI QTAFAVAKSE AGSVAANTTL MMTGVGVISV ASRDAIVHAA ELMSTISITL IILLLLLVYR SGIVLILGLI PVFSGVIVGI SAVALGFSVV YDITLGFGTA LIGEAVDYSI YFFVQSGQSA TGSDEWIRKY WPTIRLGVFT SIIGFASLLF SNLPGLAQLG LYAIAGLLTA AIVTRLVLPT LLPGNFKSRD LSSIGEHLLR LTRTLSALRP GVVLLLIAAS AVLVSHRDKI WNYDLSALSP VPAAAQRLYT QMRADLGVSE GGYLVVVSAP TVNATLAVAE KTGNALQGLV ENHVIAGYES PARYLPSVTL QQERQAAIPP KDVLERRLRE ALLGLPVKAS LFTPFIKESE AQRTLTPLTL ADLRGTSIGM VVNSMLIRHG NGWDAILPLK APASGTVDAR RVRASLARHH ITGAMLIDLS GTSNQLYKSY LINGIKLSLS GVAFIALLLL FVLRSPVRVF RILLPLIAAV LTVTAGLVLL GYELNIMNLI GLMLIVAIGS NYALFFDQGA RQVHGEIAPR TLASLVIANI TTIMGFGPLA FSGVPVLQAI GAAVAPGVVL ALLFSASFSQ QSTV
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