Gene Lferr_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0934 
Symbol 
ID6876899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp897085 
End bp897846 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content58% 
IMG OID642788814 
Productglycosyl transferase family 2 
Protein accessionYP_002219389 
Protein GI198283068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.435482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG CGTCGACTAC TCACCTGTTG CTGATTCCTA GCTACAATCC CGGTCCAAAG 
GTGTATGAAA CCGTGGCATT GGCACGGCAG CGGTGGAACC CCGTATGGAT AGTGGTGGAT
GGCAGCACCG ACGGAACGGC TGCGGGGCTG GAGGCGCTGG CCGCCCAAGA CGGCGGGTTA
CACGTTTTTC AACGCACCAG TAATCAGGGT AAGGGCGCGG CCGTGCTTTT CGGTCTGGAT
CAGGCCGCCA CGCAGGGTTA CACTCATGTG CTGACGATGG ATTCCGACGG GCAGCACCCC
ATGGATGCCA TTCCCGCGTT TATGGCAGCA TCCCTGCAAA ATCCGGATGC CATGATCCTC
GGAGTCCCGG TCTTCGATGC CAGCGCTCCA ACCTTGCGAG TAAAAGGCCG CAGGGTATCC
AACTGGTGGG CCAACTTGGA GACCCTGGGG GGAGGCATTG GTGATTCCCT GTTTGGTTTT
CGCGTTTATC CCATCGCGCC GTTGCGGCAA CTGATGCACT CACAACGCTG GATGCGACGC
TTCGATTTCG ATCCGGAGGC GGCGGTGCGT ATGTCCTGGC GTGGTGTCAG AATTATCAAC
ATGCCAGCAA CAGTCCGCTA TTTCCGCGCC GATGAGGGCG GAGTATCCCA TTTTCGCTAT
CTGCGGGACA ACGTGCTGCT TACCTGGATG CACACTCGCC TGTTCTTCGG TTTTCTGGTT
CGTTTGCCCG TATTGTTGTT GCGTTACTGG TCTGGGCGGT AA
 
Protein sequence
MSGASTTHLL LIPSYNPGPK VYETVALARQ RWNPVWIVVD GSTDGTAAGL EALAAQDGGL 
HVFQRTSNQG KGAAVLFGLD QAATQGYTHV LTMDSDGQHP MDAIPAFMAA SLQNPDAMIL
GVPVFDASAP TLRVKGRRVS NWWANLETLG GGIGDSLFGF RVYPIAPLRQ LMHSQRWMRR
FDFDPEAAVR MSWRGVRIIN MPATVRYFRA DEGGVSHFRY LRDNVLLTWM HTRLFFGFLV
RLPVLLLRYW SGR