Gene Lferr_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0921 
Symbol 
ID6876886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp884870 
End bp885454 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content57% 
IMG OID642788801 
Producthypothetical protein 
Protein accessionYP_002219376 
Protein GI198283055 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCT ATGCAAAGCA GACAGAGGCG GTTTATGTAG ATGTCCCATT GCTGGACGCT 
ACCCCGGAGA ACCTCGCGGA ATACGGCGTG ATGATTGGCG AGGCGGTACA CCGGCCGGGA
CTTTCGATTC CCTTTTATAA GGGGACTGTG GAAGAGGGGC AAAATCTCGA TTTTGAATAT
ACCGGTCGCG CGGTGGTCCG CACGGCCCGG ATATCGCACC GTAACCCCGA GATTACCTGG
CTGGAACGGC ACCTCAATAT GACGCAGATT TTTGTCGGGC TGGGCAGCAT TCCCTTCGCC
ATGGTGCTGG GTAAACCCAA TCAGGGCAGC GGGGAAAATG TCCCCCGTCT GGAGGACGTC
CGCGCTTTTC GCATTCCGGC GGGGCAGGGG GTGATGATTC ATGCGGGTAC CTGGCACGAT
TTTCCCATGT CCATTGGCGA TCCGGTGACG GTGATGACCA TGAATTCTGA CGAGGTGGTC
ACTGCTTTGG CGAACGCTCA GGCAGCAGAT GAGATGGACG ATGGGGACGT GTACAAGATC
GACATCCAAC GTCGCACCGG GCGGGTGCTC CGGGTTCCCT TTTAA
 
Protein sequence
MDTYAKQTEA VYVDVPLLDA TPENLAEYGV MIGEAVHRPG LSIPFYKGTV EEGQNLDFEY 
TGRAVVRTAR ISHRNPEITW LERHLNMTQI FVGLGSIPFA MVLGKPNQGS GENVPRLEDV
RAFRIPAGQG VMIHAGTWHD FPMSIGDPVT VMTMNSDEVV TALANAQAAD EMDDGDVYKI
DIQRRTGRVL RVPF