Gene Lferr_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0920 
Symbol 
ID6876885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp884000 
End bp884866 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID642788800 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_002219375 
Protein GI198283054 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.815419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT GGATAAGGCC GCGACATTTG CCGGAAGCCC TGGAGATATT GGCGGCAGCC 
CCCCGCCCAT ATCGGGTGAT TTCGGGTGGG ACCGATCTTA TGGTGGAGAG TCATCTCGCC
CCGGAACGGC GCCCGGAGTC CTGGCTGGAC ATCAGCGGAC TGCAGGAGTT GCAGGGGCTG
CAGATTACGG AAGAGGGTAT CCGGATTGGC GCGGCTACTT CCCTGGAAGC GATTCGCCGG
CATGCGGAAG TGGTCGCCCA CTGGCCGATG CTGGCAGCCT CGGCGGCGGT GACCGGGGCG
CCGCCCATTC AAAACCGCGC CACGCTGGGT GGCAACGTTT GCAATGCATC ACCTGCGGCG
GACAACGCGC CGGTGCTGCT GGCTTATGGC GCACGTCTGG AGATCGCCCA TCATCATGGT
TCGCGTTGGT TGCCTTATGG AGATTTCCAT CAGGGGTATC GTAAGACGGC CTTGCGAGCT
GGAGAGTTGC TCAGCGCGTT CTGGATTCCT TACCCCCCCA AACGCAGCCA TGGCTATTTT
CGGAAAGTCG GAACACGGGC AGCGCAAGCT ATTGCCAAGG TGAGTATCGC GGCGCTCATC
GAAGAAGATA GGGGGGGAAT TATTCAGAGT GCGCGTTTCG GCGTGGCGAG TGTAGCGGCG
ACTCCCTGCA CCTTGCCAAC CGTGAGCCAA TATCTGCTGG GACGTGCGTT GCGTGATATC
ACCGACGCGC AGGTGCGTCA GAGGGTAGGG CAGGATATTG CACCCATTCA GGATATCCGC
TCAACGGCGG CATATCGTTT GGAGATAGCT TCCCGGCTGG TGCTGGACGC CATACATGGA
CGTGGTGAAT CGAAAAAGGA GGATTAG
 
Protein sequence
MPEWIRPRHL PEALEILAAA PRPYRVISGG TDLMVESHLA PERRPESWLD ISGLQELQGL 
QITEEGIRIG AATSLEAIRR HAEVVAHWPM LAASAAVTGA PPIQNRATLG GNVCNASPAA
DNAPVLLAYG ARLEIAHHHG SRWLPYGDFH QGYRKTALRA GELLSAFWIP YPPKRSHGYF
RKVGTRAAQA IAKVSIAALI EEDRGGIIQS ARFGVASVAA TPCTLPTVSQ YLLGRALRDI
TDAQVRQRVG QDIAPIQDIR STAAYRLEIA SRLVLDAIHG RGESKKED