| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0913 |
|---|
| Symbol | |
|---|
| ID | 6876878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 875647 |
|---|
| End bp | 876405 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642788793 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002219368 |
|---|
| Protein GI | 198283047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCA CGATGCCTAG GGCCACAAAT TATTTACTTA TGCCGGAGCC GAAGGAACGC
CATTTTAAGT ATGCCGTGGG CGGGGCGGTG GCGGTTGAAG TCCTGCTCGT GCTCGGCTTG
GTTTGGTATG GGCACAGTAG ACCTCCGATA AACGCCGTCA AGCCCAAGGA TCACGTCATT
GCGGTACAAA TGATGACTTT GCCGCAACCA CCGCCGAAGG TGTTGCCCAA GCCTCTTCCA
AAGCCGGTTC CTCCCAAACC GGTGCTGCAT CATGTGACGC CGCCACCGCC ACCGCCGCAC
CCGAAGATGG CGATTCCGCC AAAACTGGCA CCGACGCCGC CCGCGCCACC GGTTAAGACG
GCGACGCCAC CAACGCAGAT CCCTCAATCA GTAGCGACGC CAGCGCCTAA GCCGCTAGTG
ACGCCACCTC CTGCCCCGCC GCCCATGTCG GCCCAGCAGA CGGCCTCGTT GATGGGGCGT
TATGTCGGGC TGTTGCGGCC AATGATTCAG CAGAATCTGC ATGTGCCCGC AGAGTTAAAA
GCGATGGGCA TGAGCGGCAA GGCGACCGTT GAGTTTGAGA TCTCGCCTAC GGGCCAGTTG
CTTTGGGCAA AAATTATCCA GTCTAGTCCA TTGAGTGCGG TAAATCGTGC AGCACTTGCA
GCAGTAAAGG ATGGTGGCTT CCCACCATTT CTCAAAAAGA TGCCTAAACA GAATACGGTA
TTTCAAATCG ACGTTGAAGT GGGTGCCGGA TCAAGTTAG
|
|---|
| Protein sequence | MTTTMPRATN YLLMPEPKER HFKYAVGGAV AVEVLLVLGL VWYGHSRPPI NAVKPKDHVI
AVQMMTLPQP PPKVLPKPLP KPVPPKPVLH HVTPPPPPPH PKMAIPPKLA PTPPAPPVKT
ATPPTQIPQS VATPAPKPLV TPPPAPPPMS AQQTASLMGR YVGLLRPMIQ QNLHVPAELK
AMGMSGKATV EFEISPTGQL LWAKIIQSSP LSAVNRAALA AVKDGGFPPF LKKMPKQNTV
FQIDVEVGAG SS
|
|---|
| |