Gene Lferr_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0911 
Symbol 
ID6876876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp874407 
End bp875111 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content55% 
IMG OID642788791 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002219366 
Protein GI198283045 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGT TCAGTTATCT CGTGCACCTT GCCAACTACT CAGATGGCGT TCTGTACATC 
TTGATGTTCC TTCTCGTGGT CGAGCTTGCC GTGATCTTCG ATCGGGCCTG GTATCTTCGT
AACGCCATCA GCAGAGGTAA GAAAATTCTT TGGGGAATAT CCGCCCGTGG CAAGTTGCGG
CGCCCTGACC TGGAAGATCT GGTGGTTTTG TCGAAGGGGC TTCCCGAAGA ATCTCTGCTG
GGTGTAGCGC TCCGACATTT CAATTTGATT CATCACTACG GCAGCGCGCG TGGTGAAGCC
TTCGCGAACC GTTTGGACGA AGCTATTTTC CTGACGACGC CAAGCCTGGA TAAGCGCCTT
TGGATATTGG ACACCATTGT CACCCTGGCG CCCCTTCTGG GCCTGTTCGG TACCATTCTC
GGCATGTTTC ACGCGTTCTC CATTCTCGCG GCGCCTGGTC ATAATCCTGC GTCCGTTACC
GGCGGTGTCG CGGATGCGCT GATTGCCACC GCGTCTGGAC TTTTTATCGC CATGATCGGC
TTGCTGAGCT TTAACGCATT CAACAACGCC ATCGAGAAAA CCATTTTCCA GCTCGAGTCG
TTGAAGGTGG TGCTCATGAA CCGCTTGGAT GGCGCGCCCG TGGTATTAGA GGAGACGGCA
GTCAGCGCCC CGTCATCAGC AACGGCGTCT GAAATGACCG CATGA
 
Protein sequence
MISFSYLVHL ANYSDGVLYI LMFLLVVELA VIFDRAWYLR NAISRGKKIL WGISARGKLR 
RPDLEDLVVL SKGLPEESLL GVALRHFNLI HHYGSARGEA FANRLDEAIF LTTPSLDKRL
WILDTIVTLA PLLGLFGTIL GMFHAFSILA APGHNPASVT GGVADALIAT ASGLFIAMIG
LLSFNAFNNA IEKTIFQLES LKVVLMNRLD GAPVVLEETA VSAPSSATAS EMTA