Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0902 |
Symbol | |
ID | 6876867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 863987 |
End bp | 864679 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788783 |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_002219358 |
Protein GI | 198283037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.101359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTCA CCCTTTTTGA TCTCGACAAC ACCCTGCTTT CCGGCGACTC CGACCATGCC TGGATGGAGT TTCTCGCCAG CCGCGGCATT GTCGATGCGG AGCGCTTCAA CCGCATGAAT GATCAGTTCT ATGCGGAATA CCTGGCGGGT GAATTGGATA TTCACGCCTT CCTGGAGTTT CAGTTGGCCC CCCTGGCGGC GCATCCCCGG GCGCTGCTCG ACACCTGGCA CCGGGAATAT CTGCAGGAGC GGGTGCTGCC CATGATCTCC GACCATGCCC GCGCCCTGAT CGAGGACCAT CGCCGGCAGG GCGATACCCT GGTCATCATC ACTGCGACCA ATCGCTTTGT GACGGCACCT ATCGCCCGGG AACTGGGTAT CGCCCACCTG CTGGCGACAG AGGCTGAGGA AACGGCCTCC GGCGACTTTA CCGGCCGCAG TGTCGGCCTT CCCTGTTTCC AGGCCGGCAA GGTACAACGT CTGCGCGACT GGCTGGAAAC ACAGGGCCTG GACTGGAATC AAAGCCTCGG GGACAGCAGC TTTTACAGCG ACTCCTATAA CGATCTGCCC CTGCTCGAAT GTGTCACCCG GCCAGTAGCC GTGGATCCCG ATCCGCGCCT GCGCACCTTG GCTGAAGAGC GGGGCTGGCC GATTCTCTCC CTGCGTCCGG CATCTGCGAA GTTGGCTTTG TGA
|
Protein sequence | MALTLFDLDN TLLSGDSDHA WMEFLASRGI VDAERFNRMN DQFYAEYLAG ELDIHAFLEF QLAPLAAHPR ALLDTWHREY LQERVLPMIS DHARALIEDH RRQGDTLVII TATNRFVTAP IARELGIAHL LATEAEETAS GDFTGRSVGL PCFQAGKVQR LRDWLETQGL DWNQSLGDSS FYSDSYNDLP LLECVTRPVA VDPDPRLRTL AEERGWPILS LRPASAKLAL
|
| |