Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0886 |
Symbol | |
ID | 6876851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 846454 |
End bp | 847047 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642788768 |
Product | Fimbrial assembly family protein |
Protein accession | YP_002219343 |
Protein GI | 198283022 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TCAATCTGCT GCCTTATCGG GAGGCCCAGC GGGTCCAGCG CAGCCAGCTT TTGGCGCTGG CTCTCGTCGG CATCCTGCTG CTCACCGCGC TGTTCTACTA CGGCATCTAC AGCATCTTCA GCGCACGCGT TTCCGCCGAA CAGCAAAAAG TGCAGTATCT GCAAAACGTC ACCACCCAAC TGAATCAAAA AATCGCGTCC GTCGCCGACC TGCGCAAGAA ACGCGACCAA CTGCTCGCCC GCGAGGACAT CATCACCGAC CTGCAGGACC AGCGGGATAT GGTGGTGCAT CTCTTCAACA CCCTGGCCAG GGTTACACCC GATGGCGTAT TCCTGACCCA CCTCAAGCAG GCAGGCGACA GCATTACCGT CGACGGCTAT TCCCAGGCAA ACGATCAGGT CGCGGCGTTC ATGCGCAACA TCGAGGCCTC CAGGATTTTT GAGAAGCCGG AACTCAACAT CATCAGTAAA TCCAAACTGG GTAACGAAGA AGTGGGGCAA TTCACGCTGC AGATGAGCAT CCGCACGCCA ACCGCCGCGC ATAAAAGTGG CGCGCCTGCG CAGAATAAGG ATACCCGGCC ATGA
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Protein sequence | MIRINLLPYR EAQRVQRSQL LALALVGILL LTALFYYGIY SIFSARVSAE QQKVQYLQNV TTQLNQKIAS VADLRKKRDQ LLAREDIITD LQDQRDMVVH LFNTLARVTP DGVFLTHLKQ AGDSITVDGY SQANDQVAAF MRNIEASRIF EKPELNIISK SKLGNEEVGQ FTLQMSIRTP TAAHKSGAPA QNKDTRP
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