Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0879 |
Symbol | |
ID | 6876844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 839124 |
End bp | 840296 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788761 |
Product | deoxyguanosinetriphosphate triphosphohydrolase |
Protein accession | YP_002219336 |
Protein GI | 198283015 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0232] dGTP triphosphohydrolase |
TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.269918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATC TGGCCTCTCC GGGACAGCCC GGGGGCTTGG CACCATACGC CGCCGACCCC GCGCAGAGCC GTGGCCGCAA ACACGCAGAA GAGCCGCCCG CCGGTCGCAG CGCCTTTCAG CGCGACCGCG ACCGGGTCAT CCACTCCGGC GCATTCCGCC GTCTGGAATA CAAGACCCAG GTCTTTGTGA ATCACGAGGG AGATCTCTAC CGCACCCGCC TCACCCACAG CCTGGAAGTC GGACAGGTGG GGCGCGCCAT CGCCCGTCAG TTGGCCTTGA ACGAGGATCT GGTCGAAGCC ATCGCTCTGG CCCACGATCT GGGTCACACC CCTTTCGGTC ACGCCGGACA GGATGCCCTG CAGGAATGCA TGGCCGGCCT AGGCGGTTTC GAGCACAACA TCCAGTCCCT GCGAATCGTG GACCATCTGG AAAAGCGCTA CGGCGACTTT CCAGGCCTGA ACCTGACCTT CGAAACCCGC GAGGGCATTC TCAAGCATTG CGCCAAAAAT AAAGCCCACG ACCTGGGCGA CGTGGGTGAA CGCTTTTTGC GGGGCTCCCA GCCCAGCCTG GAGGCGCAGA TCACCAATCT CGCGGATGAG ATCGCCTATA ACAACCATGA TATCGATGAC GGCCTGCGCG CCGGTCTGCT GAACCGCGAA GAACTCTGCG CCAACACGTT ATACGGGACG ATTTTCGCCG AGGTGCAGCA ACGCTTTCCC GACGCTTCCG CGACCATATT GCGTCACGAA ACCGGCCGCC GCCTCATCAA TCTGCTCATC CACGATCTGG TCAGTGAGAC CCGGCGCCGC ATCGCGGCCG AAGGCGTCAC CACCATAGGG GAAGTGCGGG CCGCGTCGCA GCCGCTCGCC GCCCACAGTC CGGCCATCGC CCACGAAGTC GCCACCCTCA AACGCTTTCT CTTTCAGCGC ATGTATCGCC ACCCCCGGGT GCACCGTCAG GCGGAAAAAG CCAAGCGCCT GGTACGCAAG CTGTTCCATA CCCTGCTCGA AGATCCGCGG CTGCTGCCAT TGAAATACCA GGTACGCATC AATGAATGCG ACGGCGCAGC GAAGCGTCAG GCGCGTGTCG TTGCCGACTA TGTGGCGGGC ATGACCGACC GCTTTGCCAT CGCCGAGTAT GACCGTCTGT TTGACCCGCA CGGCGAGGCC TGA
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Protein sequence | MPDLASPGQP GGLAPYAADP AQSRGRKHAE EPPAGRSAFQ RDRDRVIHSG AFRRLEYKTQ VFVNHEGDLY RTRLTHSLEV GQVGRAIARQ LALNEDLVEA IALAHDLGHT PFGHAGQDAL QECMAGLGGF EHNIQSLRIV DHLEKRYGDF PGLNLTFETR EGILKHCAKN KAHDLGDVGE RFLRGSQPSL EAQITNLADE IAYNNHDIDD GLRAGLLNRE ELCANTLYGT IFAEVQQRFP DASATILRHE TGRRLINLLI HDLVSETRRR IAAEGVTTIG EVRAASQPLA AHSPAIAHEV ATLKRFLFQR MYRHPRVHRQ AEKAKRLVRK LFHTLLEDPR LLPLKYQVRI NECDGAAKRQ ARVVADYVAG MTDRFAIAEY DRLFDPHGEA
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