| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0830 |
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| Symbol | |
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| ID | 6876795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 787135 |
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| End bp | 788034 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642788712 |
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| Product | Patatin |
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| Protein accession | YP_002219287 |
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| Protein GI | 198282966 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00263851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.492745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG GCCTGGCTCT TGGCAGTGGC GCGGCCCGCG GGTGGGCGCA TATAGGGGTA
ATAAACGCGC TGAATGATCA AGGAATCGTA CCGGATATCG TTTGTGGCAC GTCCATAGGC
GCGCTGGTCG GCGCATCCTA TGTTTCCAAC AATCTTGAGA AGCTGGAGAA ATGGGTTTGT
TCACTGACAA AGTTTGAAAC AGCCAAATTT TTTGCCATCA ACATGTCATT GAATGGTTTT
GTCAATAAAG AGCGGCTACA TTATTTTCTC AATAAATATG TGGCAGATGA TGACTCAAAA
ATAGAGGATA TAGTTAACAA AAAATATGCA TCGGTAGCAA CCGACTTGCA AACCGGCAGC
GAGATCTGGT TGACGGACGG TTCAATTCTG GATGCCGTCT TTTCGTCCAT ATCCATGCCC
GGCCTCTTTC CGGCGGTCAA GAACAACGGC AGGTGGCTCA TAGATGGCGG ATTGGTGAAT
CCCGTCCCCG TTTCGGTCTG TCGGGCTCTT GGCGCCGATG TGGTTATTGC CGTAACGTTG
AACGATGATA TCGTTGGAAA ACATCTTCAA AATAACAAAA TCCTGAAAAC ACAGGATGCC
GGCGTTACCG GAAAAATATC AGACCTGATC ACGGCATATA CCGCCTCGAT ATTTCCGGCG
ACAGGCGATG AGGAGCAACC ACCCAGCCTC TTTGATGCCA TCGCCGGCTC GGTGAATATC
ATGCAGGACA GGATCACCAG GAGTCGCATG GCCGGAGATC CTCCGGATAT CCTGCTTTCT
CCAAGGCTGT CCCACATTGG CTTACTGGAG TTTTATCGCG CCGGTGAAGC CATCACGGAG
GGGAAAGAAT GCGTAAAGAG CATGTTACCG GAAATACAGC GTGTGTTGGG TATATCCTGA
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| Protein sequence | MTIGLALGSG AARGWAHIGV INALNDQGIV PDIVCGTSIG ALVGASYVSN NLEKLEKWVC
SLTKFETAKF FAINMSLNGF VNKERLHYFL NKYVADDDSK IEDIVNKKYA SVATDLQTGS
EIWLTDGSIL DAVFSSISMP GLFPAVKNNG RWLIDGGLVN PVPVSVCRAL GADVVIAVTL
NDDIVGKHLQ NNKILKTQDA GVTGKISDLI TAYTASIFPA TGDEEQPPSL FDAIAGSVNI
MQDRITRSRM AGDPPDILLS PRLSHIGLLE FYRAGEAITE GKECVKSMLP EIQRVLGIS
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