Gene Lferr_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0824 
Symbol 
ID6876789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp782672 
End bp782995 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content54% 
IMG OID642788706 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_002219281 
Protein GI198282960 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0263078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.761008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA CCTTATCGGA AAGTGCGGCG CGGCAGGTGC GCAAGAGTAT TGCCAAACGT 
GGCAAGGGTC TGGGTATCCG CATCGGCGTG AAAACCAGCG GTTGCTCGGG GCTGTCGTAT
GTCATGGAGT TTGTGGATGT CCCCAACCCG GAAGATCTGG TGTTTCCCCA TGATGACGTG
AATCTTTTCG TGGACCCCAA AAGTCTCATT TATCTGGATG GCACCGAACT GGACTTCACC
CGGGAAGGCT TGAACGAGGG ATTCCGTTTT AATAATCCCA ACGTGAAGGA TGCCTGCGGT
TGCGGTGAGA GCTTTACGAC CTGA
 
Protein sequence
MALTLSESAA RQVRKSIAKR GKGLGIRIGV KTSGCSGLSY VMEFVDVPNP EDLVFPHDDV 
NLFVDPKSLI YLDGTELDFT REGLNEGFRF NNPNVKDACG CGESFTT