Gene Lferr_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0812 
Symbol 
ID6876777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp773383 
End bp774339 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content60% 
IMG OID642788694 
Productprotein of unknown function DUF88 
Protein accessionYP_002219269 
Protein GI198282948 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG GTGAGCTGCA TATCGGTGTC TATGTGGATG CCGAAAATAT TCGTTACAAC 
GGTGGTTATG CCATGCGTTA TGACGTACTG CGACGTTTCG CCGGGCGGGA AGAGGAGGCG
CGACTACTAC GCCTGAATAC CTACATGGCG GTGGATGGCG AGCGCATGAA GCGTGACCGC
GAGTACCGGG AACGGATTCG CGGTTATCAG CAGGCGGTGC GCGATCTCGG TTGGAAAATC
ATCGAAAAGC CGGTGCGCTG GTTCGTGGAC GAAGAAGGCA ACAGCATGTC CAAAGCCAAT
GCCGATCTGG ATCTGGCGGT GGATGTGATG CTGCAATCCG AGCGCCTGGA TCAGGTGCTG
CTGGTTACGG GAGACGGGGA TTTCCTGCAG GTGGTTCGCG CGTTACAAAA TAAGGGATGC
CGGGTCGAGG TGCTGGCGTT CAGGAATGTT TCCAGAGAAC TGCAGTATGA AGCGGACGCT
TTCTACCCCG GTTATCTGGT GCCCGGGCTG ATTCCCACCC GCGGCGACAT GCGGGTGCCG
TGGGGGGAGA TGGGATCACG CATCCGCGGT ATCTGCATCC GCTGGGAGGC GGACCGCGGC
TTCGGCTTCG TCCGCTTTTT GACGGGTATT TCCCCACGGT TGTGGGTGAC CGATACCCGG
CAGGACGACT CTCCCTACGA GTCGGCCTTT GTCCACATTT CTGACCTGCC GCGCGAACTG
GATACGGATG ATCTCCCGAG CCGGGATATC ATTCTGGAGT TTGATCTCGA GCCCAGCGAG
ACGGAAAAGG GCGGCTTTAT CGCTCGCCGC TGCACAGTGG TCAATCGCTA TGATGGCCGC
ACCGGGGGCT TGTCGAAGCA GCCCGACCGC ATCTCCACCA CGGAACGGGG GGAGGATGCG
GGGTTCATCC GGCAGGACGA AGCCGAGGAG CATGAGGCGG TCGCCGAATC CTCCTGA
 
Protein sequence
MSNGELHIGV YVDAENIRYN GGYAMRYDVL RRFAGREEEA RLLRLNTYMA VDGERMKRDR 
EYRERIRGYQ QAVRDLGWKI IEKPVRWFVD EEGNSMSKAN ADLDLAVDVM LQSERLDQVL
LVTGDGDFLQ VVRALQNKGC RVEVLAFRNV SRELQYEADA FYPGYLVPGL IPTRGDMRVP
WGEMGSRIRG ICIRWEADRG FGFVRFLTGI SPRLWVTDTR QDDSPYESAF VHISDLPREL
DTDDLPSRDI ILEFDLEPSE TEKGGFIARR CTVVNRYDGR TGGLSKQPDR ISTTERGEDA
GFIRQDEAEE HEAVAESS