Gene Lferr_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0805 
Symbol 
ID6876769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp766018 
End bp766734 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID642788686 
ProductABC transporter related 
Protein accessionYP_002219262 
Protein GI198282941 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAACC ATCTGCGTTT GGCAAAGCTT GGAAAGGATG GCGTGACTGC ACTTCTGGTT 
CTGGACAATC TGGCAAAACG GCTTCCCGGA GACCCTCAGC GTTGGTTATT CCGCAATGCG
AGCCTCCACA TAGCACCAGC AGACTTTGTG GCCGTCATGG GGGAAAGCGG CGTTGGCAAA
AGCACCCTGC TCAATATCAT TGCCGGGCTG GATCGCCCCG ATGCGGGACA CATGACATTC
AAGGGTGAGC CGCTCGACAC CCTGGATGAC GATGCGCGTA CGCTCCTGCG GCGGCGGCAC
ATGGGTTTTG TGTTTCAGGC CTTTCATCTG ATCCCACAAT TGACCGTAGA GGAAAACATC
GCCCTGCCTT GGCGACTGAA CGGCCTCTCC CGGCGCGACA TGAATCAGCG GGTTAAAACT
CTGGTGGAAC GGCTCGGCAT TGGCAGTCAC CTGAATGCCT GGCCGCGGGA GCTTTCCGGC
GGCGAGATGC AGCGGGTTGC GGTAGCGCGG GCGGTCGTAC ATCGCCCGTC GCTGATTCTG
GCGGACGAAC CGACGGGGAG CCTCGATGCC GAATCTGCGG AAACCGTGCT CAGCCTCCTG
CGTGAGGCGG GAGAAGCCGA GGCGGCGGCT ATTGTGCTGG TGACCCATTC GGCGACAGCG
GCAGACTGGG CGCAACGCCG CCTGCGTTTC GACGCGCAGG GCTTCCATCC CCTGTGA
 
Protein sequence
MVNHLRLAKL GKDGVTALLV LDNLAKRLPG DPQRWLFRNA SLHIAPADFV AVMGESGVGK 
STLLNIIAGL DRPDAGHMTF KGEPLDTLDD DARTLLRRRH MGFVFQAFHL IPQLTVEENI
ALPWRLNGLS RRDMNQRVKT LVERLGIGSH LNAWPRELSG GEMQRVAVAR AVVHRPSLIL
ADEPTGSLDA ESAETVLSLL REAGEAEAAA IVLVTHSATA ADWAQRRLRF DAQGFHPL