Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0805 |
Symbol | |
ID | 6876769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 766018 |
End bp | 766734 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642788686 |
Product | ABC transporter related |
Protein accession | YP_002219262 |
Protein GI | 198282941 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAACC ATCTGCGTTT GGCAAAGCTT GGAAAGGATG GCGTGACTGC ACTTCTGGTT CTGGACAATC TGGCAAAACG GCTTCCCGGA GACCCTCAGC GTTGGTTATT CCGCAATGCG AGCCTCCACA TAGCACCAGC AGACTTTGTG GCCGTCATGG GGGAAAGCGG CGTTGGCAAA AGCACCCTGC TCAATATCAT TGCCGGGCTG GATCGCCCCG ATGCGGGACA CATGACATTC AAGGGTGAGC CGCTCGACAC CCTGGATGAC GATGCGCGTA CGCTCCTGCG GCGGCGGCAC ATGGGTTTTG TGTTTCAGGC CTTTCATCTG ATCCCACAAT TGACCGTAGA GGAAAACATC GCCCTGCCTT GGCGACTGAA CGGCCTCTCC CGGCGCGACA TGAATCAGCG GGTTAAAACT CTGGTGGAAC GGCTCGGCAT TGGCAGTCAC CTGAATGCCT GGCCGCGGGA GCTTTCCGGC GGCGAGATGC AGCGGGTTGC GGTAGCGCGG GCGGTCGTAC ATCGCCCGTC GCTGATTCTG GCGGACGAAC CGACGGGGAG CCTCGATGCC GAATCTGCGG AAACCGTGCT CAGCCTCCTG CGTGAGGCGG GAGAAGCCGA GGCGGCGGCT ATTGTGCTGG TGACCCATTC GGCGACAGCG GCAGACTGGG CGCAACGCCG CCTGCGTTTC GACGCGCAGG GCTTCCATCC CCTGTGA
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Protein sequence | MVNHLRLAKL GKDGVTALLV LDNLAKRLPG DPQRWLFRNA SLHIAPADFV AVMGESGVGK STLLNIIAGL DRPDAGHMTF KGEPLDTLDD DARTLLRRRH MGFVFQAFHL IPQLTVEENI ALPWRLNGLS RRDMNQRVKT LVERLGIGSH LNAWPRELSG GEMQRVAVAR AVVHRPSLIL ADEPTGSLDA ESAETVLSLL REAGEAEAAA IVLVTHSATA ADWAQRRLRF DAQGFHPL
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