Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0804 |
Symbol | |
ID | 6876768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 763514 |
End bp | 766021 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788685 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002219261 |
Protein GI | 198282940 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCACCC GGATTCCATG GCAAGCGGCC GTATGGCGCC CCCTCCGCCA GAGGCCGGGG GCGAGCGTGC TGGCGATCAT CGGCATTGCG CTGGGGGTCG CGCTCGGACT GGCCATCGCC CTTATCAACA TCCAGGCCGT AAGCGATTTT TCTGCCGGGC TGCGGCGCCT GTCGGGGCAG GCCGACCTGG CCCTGACGGC GCCGGGGCAG AGCTTTCCCG AACAATGGTA TGTGCGCCTG AGTATGGCCA GAGATGTGGC CGTGGCCACC CCGGAAATCC GCTTGCAGGC GCAGGTACTG CATCCTGCCC GGAAGGGCAT GCTCCCCATT CTCGGCATTG ACGCCTTCCA GGCGGCGCGC ATGGGACAAC CGCTGCTGCC TTTCAATCTG CATAGCCCGC TTGCCCTGCT GACCCCCGAC CACATTGCCC TGAGCCAGGC GGCGCTGACA CGTCTCGGCC TGCGGGTAGG GGATACGCTG ACGCTCGACG CGGACGGACA GCCACGCACA CTGCGAATCA TCGGCGAACT GCCGGGTGTG GGCAACAGCG AAGCACTCGG CGTCATGGAT ATTGCCGCAG TACAGTGGCT GTGGGGAAGG ATCGGCACCC TCAATCAGGT CGACCTGCGT CTGTATCCGG GAATACCCAT CGCTCATTTT CTCGCGCAAT GGCAGGGGCA TCTGCCGGTC GGCGCGGTGT TACAAAGCCC GGCGCAGCAG GGACACGTGG CTGCGGATGC TTCGCGCGCC TATCGCGTGA ACCTGCTGGT ACTATCGCTG GTAGCGTTGT TTACCGGAGC GTTTCTCGTC TATTCCACCC TGGCCATGGG GGTAGTGCGG CAACGGCAGC AACTGGCCCT GTTGCGGGTC CTGGGCCTGC GCCGCCGGGA AGTCGTACTG GCCGTATTGT TGCAGGGTGC GACGTTGGGT CTGCCGGGCG CGCTGCTGGG TCTGCCGCTG GGCGTGCTGG CGGCTTGGCT GGCTCTGGCA CACATGGGTG GCGACCTCGG AGCAGGATAT TTCAGTGCCA CGGCTTTGCA CTTGCAATGG CATCCGGGAC TCCTGCTGAT CTTTTTCGTG GCGGGCCTGG GAGCGGCGCT GACCGGCGCC TTTTTACCAG CTTGGGAAAC CAGCCGGGCG ATCCCCGCCC TGGCGTTGCG GGCCGGCTCT GAAGAGCAGG CCCATCAGCA GCACCAACAT CCCTGGGTAG GTCTGCTGCT CTTGGGACTG GCCTTGGCAG GGTCGTTGGC GCCGGCCATC CACGGCATCC CCTATCTAGC CTACGGCGCG GTAGCCTGCC TGCTCTTTGC CCTGCTCTTT TTACTGGCCC CGCTCCTGCG CGCACTGACC AGGCTCTTTC CCCTGCCCCA TGCCCCCGTC TGGCGTCTGG CCCTGGAACA ACTGCGGGGT GCGCCGGGGC GGGCGGCGCA AAGCCTGGCT GCAGTGGTAG TGGCCTTCAG TCTGGTCGTG GCCATGGCGG TGATGGTGGG TTCATTCCGT GACTCCGTCG CCAACTGGTT GACCGACATT TTACGCGCGG ACCTCTATGT GCAGGCTGGG ATGAATAGAG ACTCACTCCT CCCCCATGGC GCAGCGCACC AGCTTTGTGC ACTGCCCGAT GTCCGCGCCT GCTCGCCTCT GCGGCGGGTC ACTCTAAATT TGTTACCGGG ACACCCACCG GTGACGCTTC TCGCGCGGGG CATGAACATC AGCGATCCGG AGCGGGAATT GCAGATACTC CATGCGGTCA GGGTCGGGCC ACAACAGCCA CCGCCCGTGT GGATTTCGGA GATTCTGGCA GGTATCAGTG GCTGGCAGAC CGGACAGGTG ATCCATCTGC CGCTGGGTGG GCAGGAGCGG CCGGTGACCA TCGCCGGCAT CTATCGGGAT TACGCCTATC AGGAGGGTTC AGTGTCCATA CCCATTCAGC AATACCGCGT ATGGTCCGGA GACGATGCGG TCAATGGCGT CGCCCTTTGG CTGCGTCCCG GCACTGCGAT ACCGGCCGCC ATCCACAAGT TGCGGCAGAC ACTGCCCGAT GGTGGTCGAT TATTGATCGC GACCCCCAAA GAAATTCGCA GCAAGAGCCT GCAGATATTC AACCAGAGCT TTATCGCCAC CTATGCACTG GAGGCTGTCG CCATGGTGAT CGGGCTGCTG GGGGTGAGCA GCGGCTTCGG GGCGCAGACG CTCATGCGCC GCAGCGAATT CGCCATGCTC CGGCATCTGG GTCTGCGGCG GCGTGACCTG CTCACCTTGC TCTTTGCCGA GGGCAGCGTC CTTTCGCTAC TCGGAATACT CATCGGCGGT GCACTGGGGA TGGCCATCAG CATCATCCTG ATCGAAGTGG TCAATCCCCA GTCTTTCCAT TGGCACATGG GCTTTCATCC GTCCTGGCCG CTATTGCTGA CCCTGAGTGC CATCCTCTGG CTGGCGAGCA CGGCCACCAT GGTGCTGGCC GGACGGCGGG CGGTCCGGCA TACCTCCGCG GTGCTGCGCG ATGATTAG
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Protein sequence | MITRIPWQAA VWRPLRQRPG ASVLAIIGIA LGVALGLAIA LINIQAVSDF SAGLRRLSGQ ADLALTAPGQ SFPEQWYVRL SMARDVAVAT PEIRLQAQVL HPARKGMLPI LGIDAFQAAR MGQPLLPFNL HSPLALLTPD HIALSQAALT RLGLRVGDTL TLDADGQPRT LRIIGELPGV GNSEALGVMD IAAVQWLWGR IGTLNQVDLR LYPGIPIAHF LAQWQGHLPV GAVLQSPAQQ GHVAADASRA YRVNLLVLSL VALFTGAFLV YSTLAMGVVR QRQQLALLRV LGLRRREVVL AVLLQGATLG LPGALLGLPL GVLAAWLALA HMGGDLGAGY FSATALHLQW HPGLLLIFFV AGLGAALTGA FLPAWETSRA IPALALRAGS EEQAHQQHQH PWVGLLLLGL ALAGSLAPAI HGIPYLAYGA VACLLFALLF LLAPLLRALT RLFPLPHAPV WRLALEQLRG APGRAAQSLA AVVVAFSLVV AMAVMVGSFR DSVANWLTDI LRADLYVQAG MNRDSLLPHG AAHQLCALPD VRACSPLRRV TLNLLPGHPP VTLLARGMNI SDPERELQIL HAVRVGPQQP PPVWISEILA GISGWQTGQV IHLPLGGQER PVTIAGIYRD YAYQEGSVSI PIQQYRVWSG DDAVNGVALW LRPGTAIPAA IHKLRQTLPD GGRLLIATPK EIRSKSLQIF NQSFIATYAL EAVAMVIGLL GVSSGFGAQT LMRRSEFAML RHLGLRRRDL LTLLFAEGSV LSLLGILIGG ALGMAISIIL IEVVNPQSFH WHMGFHPSWP LLLTLSAILW LASTATMVLA GRRAVRHTSA VLRDD
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