Gene Lferr_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0788 
Symbol 
ID6876752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp748460 
End bp748936 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID642788669 
Producttranscription elongation factor GreA 
Protein accessionYP_002219245 
Protein GI198282924 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA AAATTCCCAT GACGGTTATT GGTGCCCAGC GGCTGCGCGA CGAGTTGCAT 
CGCCTCAAAA CCGTTGACCG CCCTACGGTG ATTGAAGCCA TTGCCGAGGC GCGCGCCAAG
GGTGATCTGT CGGAAAATGC CGAATATGAC GCCGCCAAGG AGCAGCAGGC TTTTATCGAA
GGACGTATCC GTGAGGTGGA GGATTATCTG GCCCGTGCCC AGGTCATCGA CCCCAAGCAA
CTGAATACCG GCGGTAAAAT CGTTTTTGCG GCCACTGTGG AATTGGAAGA TGCGGAAGGC
AACGAGGTGA CCTACCAGAT CGTGGGTGAT GCCGAGGCCG ACCTCAAGGA AAACAAGATA
TCCATCAGTT CCCCCATTGC CCGCGCGCTC ATCGGCAAGC ATGAAGGCGA TCCGGTTGAA
GTGCGCGCCC CCGGCGGAAC ACGGGAATAC ACCATTCTTG CCGTGCGTTA CATATAG
 
Protein sequence
MNDKIPMTVI GAQRLRDELH RLKTVDRPTV IEAIAEARAK GDLSENAEYD AAKEQQAFIE 
GRIREVEDYL ARAQVIDPKQ LNTGGKIVFA ATVELEDAEG NEVTYQIVGD AEADLKENKI
SISSPIARAL IGKHEGDPVE VRAPGGTREY TILAVRYI