| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0779 |
|---|
| Symbol | |
|---|
| ID | 6876743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 739069 |
|---|
| End bp | 739728 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788660 |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_002219236 |
|---|
| Protein GI | 198282915 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTG ACGCACTCAA AAAAATGGCG GCCGAAGCCG CTCTGCGCTA TATCCAGCCC
GGCATGGTCG TCGGGGTGGG CACTGGCTCC ACCACCAACT TCTTCATCGA AGCATTGGGC
GCTGCCAAGA TTCATGTGGA CGGCTACGTC GCGTCCAGCA TCGCTACCGA AAACCGCCTC
AAGGCACAGG GCCTCAATGT GCTCGAACTG AATGCCACGG GCGATATTCC GGTCTATATT
GACGGCGCTG ACGAGGCCGA CCCGCATTTC CGCCTCATCA AGGGCGGCGG CGGTGCCCTT
ACCCGCGAAA AGATCGTCGC CAGTGCCGCC CGACTGTTCG TGTGTATTGC GGATGACAGC
AAGGATAGAC CCATGCTCGG CAAATTCCCC CTCCCTGTGG AAGTGATTCC TTTTGCCCGC
AGCTTTGTCG CCCGGCAACT GGTGAAGATC GGTGGCAGCC CCACCCTGCG CAGCGGTATC
ACCACGGACA ACGGCAATGT CATCCTCGAC GTCACCGGAC TCGATTTCTC CGATCCGTTG
CGGATGGAAG AAACCATCAA TGCGATCCCG GGGGTGCTGG ATAATGGCAT CTTTGCCCAT
CGGCGTGCGG ATGTGATGCT GTTTGGCAGC GCGGGCGGCG TCATCGAACG CAAGGCATAA
|
|---|
| Protein sequence | MNTDALKKMA AEAALRYIQP GMVVGVGTGS TTNFFIEALG AAKIHVDGYV ASSIATENRL
KAQGLNVLEL NATGDIPVYI DGADEADPHF RLIKGGGGAL TREKIVASAA RLFVCIADDS
KDRPMLGKFP LPVEVIPFAR SFVARQLVKI GGSPTLRSGI TTDNGNVILD VTGLDFSDPL
RMEETINAIP GVLDNGIFAH RRADVMLFGS AGGVIERKA
|
|---|
| |