| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0708 |
|---|
| Symbol | |
|---|
| ID | 6876670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 668795 |
|---|
| End bp | 669370 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788588 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002219166 |
|---|
| Protein GI | 198282845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.851081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000125723 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA CCGCCAAAGA ATTACCCATC GGGAGCAAGC TGCCCGAATT TTGTCTGCCC
GTCGGTGGTC AGGCGGGGCA GTGGTGCAGT GTGCAGGCGC AGGGCAAGCC CCTGCTGGTG
CTTTTCATCT GTAACCACTG TCCCTATGTG ATCCATATCA GTAAACGCCT GGGTGAGCTG
ACGCGGCAAT GGCAGCAGCA GGGTGTGCAG GTGGTGGGTA TCAACAGCAA CGATGCCCGG
ACCTATCCAG AAGATGCGCC GGAAAAAATG CCCGTCGAAG CCCGGCGCGC CGGATATCAT
TTCCCTTATT TATTGGATGC AGAACAAGAG ATTGCCAAGG CTTTTAACGC GGTGTGCACG
CCGGATATTT TTCTTTTTGA TGCTGCGGGC GGGCTGTTCT ACCACGGTCA GTTCGATGCG
AGTCGTCCCA GGAATGATCT GCCGGTGACC GGTGAAGACC TGTCTGCAGC CGTGGCGGCA
GTGCTGGCAG GTGCCCGGCC CCCGGCCGAA GTGCTGCCCA GCATGGGCTG CAGTATCAAG
TGGCGGCCGG GCAACGAGCC GGAGGGCTGG GTATGA
|
|---|
| Protein sequence | MAMTAKELPI GSKLPEFCLP VGGQAGQWCS VQAQGKPLLV LFICNHCPYV IHISKRLGEL
TRQWQQQGVQ VVGINSNDAR TYPEDAPEKM PVEARRAGYH FPYLLDAEQE IAKAFNAVCT
PDIFLFDAAG GLFYHGQFDA SRPRNDLPVT GEDLSAAVAA VLAGARPPAE VLPSMGCSIK
WRPGNEPEGW V
|
|---|
| |