Gene Lferr_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0683 
Symbol 
ID6876645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp635101 
End bp636519 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content61% 
IMG OID642788563 
ProductPeptidase M23 
Protein accessionYP_002219141 
Protein GI198282820 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00295587 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCTTC TGTCCCGTCC CCGCGTCGGC GCACTGCTTG CCTTGATCTT GCTCCTTCCG 
GCTGGTGCGG GAGCGGGAGC GGCAACGCTT CAGGAAAAAA TACAAAATAG TCAGAAAAAA
CTGGAGCATA TACACGAGAA TCTAGGGCAG GTACAGGCGC ATCTCGCGGC GGGGCAGAAA
ACCCAGGCGC AACTGCGCGT AGAAATCAGC GCACTCGATC AGCGGGTTGT TGCGACGCAA
AAGAAGCTGG CCGGAATCCA GCAGCAGCAA CACTCGGCAC AGGCACAATT GGCCGAACTG
CGGGTAAAAA TCAATGCACT GCAAGCGGAA CTGAGTCAAC AGAAAGGCAT CCTCGCCCGG
CAGCTTCGCG GCGCATACAT GCTCGGCGGA GTTACCCCAC TGGCCGTCTG GCTGCAAACG
GAACGCCCCG GAGAACTGGG GCGCATGAGC GTCTTTTACG AGTCCCTGGC CAGGGCGCGC
AGCGCACTGA TCGTCAAAAC CCAAGGCACC GCGCAACAGA TACGGAAGAC TCGGCACGAG
GTGCAAATCC ACGAAACCCA TCTCGCTCAG TTGGCGCAAC AGGTCAGCGC GCAGGAACAA
ACGCTCCGGC AACAGCGTGA GGCTCACGCC GCGCTGGAAA ACCAGCTTGC AGCCCGTATT
GCCGCCGACA AGACCAAGAT CGCAGAATTA CAAGCGAATG CCAATATTCT CAACGGATTG
GTGAGCCGTC TGACCGTTCA GTTCCGTCAT CAGGAAGAAG TCGCCCGCGC CAAAGCTGCC
GCCGAAGCAC GACGCAAGGC CGCTGCTGCG GCCCGTCGCG CGGCGGCAAT CTCCGCGCAG
CGGGCCGCTG TCGCGCAACA TCATCTGGCC CAGGAAAGGC AGGCGGAACA GCAGGCGCAG
CGGGTGCAGG AAACAGAGCG GGCACGACAG GTTCAACGTG CGGCGAATGC ACAAAAGCAG
CCACCCACCA CCGTAGTTCG TCCGCCGGTG ATAGTCGCCA CCCCCGCTCC CGCATTACCC
GCAACCCCCA TCGTCGGGCG CGGCAGCTAC CCCGCGCCGG TAACCGGTCC GGTTACCGCG
CGTTTCGGCG CGCCCCGGGT GACTGGCGGA CTCGACTGGC AGGGTATCAC CTTTCAGGCT
CCGGTAGGGA CGAAGGTTCG CGCCATCGCG CCGGGCATGG TACTTTATGC GGGGCCTTTG
CGCGGCTATG GACAGATTGT CATCGTGCAG ATCGCACATA GTTTGTTGTC CATATACGGG
CACCTGGGCG CTACCGATGT CCACGTTGGA GAACAGGTTT CCACCGGACG CCAAGTCGGC
AGTGTGGGCA GCGGCGGCGA ACTGGGGAAC GATGGTCTCT ATTTCGAGAT GCGGAATGCT
GGCCACCCGG TCAATCCGCT GGATTACATC CACAACTGA
 
Protein sequence
MPLLSRPRVG ALLALILLLP AGAGAGAATL QEKIQNSQKK LEHIHENLGQ VQAHLAAGQK 
TQAQLRVEIS ALDQRVVATQ KKLAGIQQQQ HSAQAQLAEL RVKINALQAE LSQQKGILAR
QLRGAYMLGG VTPLAVWLQT ERPGELGRMS VFYESLARAR SALIVKTQGT AQQIRKTRHE
VQIHETHLAQ LAQQVSAQEQ TLRQQREAHA ALENQLAARI AADKTKIAEL QANANILNGL
VSRLTVQFRH QEEVARAKAA AEARRKAAAA ARRAAAISAQ RAAVAQHHLA QERQAEQQAQ
RVQETERARQ VQRAANAQKQ PPTTVVRPPV IVATPAPALP ATPIVGRGSY PAPVTGPVTA
RFGAPRVTGG LDWQGITFQA PVGTKVRAIA PGMVLYAGPL RGYGQIVIVQ IAHSLLSIYG
HLGATDVHVG EQVSTGRQVG SVGSGGELGN DGLYFEMRNA GHPVNPLDYI HN