Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0641 |
Symbol | |
ID | 6876603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 600462 |
End bp | 601706 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788523 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | YP_002219101 |
Protein GI | 198282780 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.256103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTTT ACGAGCTCTG GATCGGGCTG CGTTACACCC GCGCCAAGCG CCGCAATCAC TTCATTTCCT TCATTACCGG CACGGCGATC ATGGGCATGG TCATCGGGGT GGCCGCGCTC ATCGCGGTCA TGGCGGTGAT GAATGGTTTT GACCATACCC TGCGTTCGCG GATTCTGGCG GTGACCTCCG ATGTCATCAT TCAGGGCAAC GGGGTACCGG TACTGGACTG GCCGACGGCG GTGAAGCGCC TTTCTACGGT TCCCGGTGTG ACCGGAGTGG CACCCTATGT TCAGGCGCAG GCCATGCTCT CCCACGAAGG GCTGGTCAGT GGCGCGGTGA TCGAGGGCAT CGATCCGGCG TTGGAGAACC GCGTCAACAA GCTCAACCAA GACATGAAAA TGGGCGAGTT GCAGTCCCTG CAGACTCACC CCTGGAGTAT CGTCCTCGGA CGAGCCCTCG CGCGGCAACT GGGCGTGACC GTAGGCGACA AGATTACCCT GATCTCGCCG CAGGGGGGCG TGACCCCACT GGGGGTAACC CCCGCCCTGC GCCAGTTCAC GGTGGTGGGG CTCTTTTCCG TTGGCATTTA CGCCTACGAC AGCGGCATGG CCTATATCAA TCTGGGCGAT GCGCAGCGGC TCTACGGGCT GAACCAGGGC GTGACGGGCC TGCGCATGCA GATCAAGGAT CCCTTTACCG CCCCGGCCTT CGCTGCCCAT CTGCAACAAC AGCTTGGCGC CGCCTTTTAT ATCCAGGACT GGACCCAGAC CCACGAGAAC TTCTTCAAGG CCCTGAGCAT GGAGAAACTG GTGATGTTCG TGATCCTGTC GCTGATCATC GCCGTCGCCG CCTTCAATAT CGTGGCGACG CTGGTGATGG TGGTCACCGA TAAGGAAACG GATATCGCCA TCCTTCGCAC CATCGGCGTG ACGCCACGCA GTATCATGCT GATTTTTATG GTTCAGGGCG GGATCATCGG ACTCTTTGGC ACGCTGCTCG GTGTCTTCTT CGGGGTGTTG CTGGCGTTGA ATATTCCGAC CCTGGTACCG GCCATCGAGC ACTTGTTTCA CGTCCAATTC ATCTCGCCGG AGGTTTATTC CATCAGCCAG TTGCCCTCCA AGCTGGAGCC CTGGGATGTG ATCCATGTGG CCATTGCCGC GCTCATCATG AGCTGGATAG CGACGTTGTA TCCCTCCTGG CGCGCCTCCC GCGTCGCCCC TGCCGAGGCC CTGCGTTATG AGTGA
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Protein sequence | MRFYELWIGL RYTRAKRRNH FISFITGTAI MGMVIGVAAL IAVMAVMNGF DHTLRSRILA VTSDVIIQGN GVPVLDWPTA VKRLSTVPGV TGVAPYVQAQ AMLSHEGLVS GAVIEGIDPA LENRVNKLNQ DMKMGELQSL QTHPWSIVLG RALARQLGVT VGDKITLISP QGGVTPLGVT PALRQFTVVG LFSVGIYAYD SGMAYINLGD AQRLYGLNQG VTGLRMQIKD PFTAPAFAAH LQQQLGAAFY IQDWTQTHEN FFKALSMEKL VMFVILSLII AVAAFNIVAT LVMVVTDKET DIAILRTIGV TPRSIMLIFM VQGGIIGLFG TLLGVFFGVL LALNIPTLVP AIEHLFHVQF ISPEVYSISQ LPSKLEPWDV IHVAIAALIM SWIATLYPSW RASRVAPAEA LRYE
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