Gene Lferr_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0633 
Symbol 
ID6876595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp591571 
End bp592893 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID642788516 
ProductHomoserine dehydrogenase 
Protein accessionYP_002219094 
Protein GI198282773 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG ATTTGGCTCC GGTACGGATC GGTATTCTCG GCATGGGCAC TGTCGGCCAG 
GGGACGGTGC GGGTGCTGGA GCGCAATGCG GAAGAAATCA CCCGTCGGGT CGGGCGGGAG
CTACGGGTGG TCCATGCGGC GGTGCGTAAT CCGGCGCGTC TGGAAGGATT GGGGCTGGAT
GCGCGGATCA GCAGCGATCC CTGGGCGGTG GTGCGCGATC CCGAGGTGGA CGTGGTCGTC
GAGGTGATGG GTGGGCAGGA GCCTGCCCTG AGCCTGCTGA TGGCCGCTAT CGCGGCGGGT
AAACATGTGG TGACCGCCAA CAAGGCACTG CTGGCCGAGC ATGGCAACGA GATTTTCGCG
GCGGCGCAGG CGCGGGGGGT GATGGTCGCC TTCGAGGCGG CGGTGGCGGG TGCCATTCCC
ATCATCAAGG CGATCCGCGA GGGGCTGGCG GGCAACCGGA TTCAGTGGCT GGCGGGCATT
ATCAACGGCA CCAGCAACTA TATCCTCTCC CAGATGTTCC GCGAGGGCTG GGACTTTCAG
CAGGCCCTGG CTGAAGCGCA GCGGCTGGGT TATGCCGAGG CCGATCCGGG GCTGGATGTG
GATGGCGGCG ATGCCGCGCA CAAGATTACC TTGATGGCGT CCATTGCTTT CGGTATTCCG
GTGGATTTCG CCCATTGCCA TGTGGAAGGC ATCCGTGCGC TGGAACGGAC GGATGTGGTC
TATGCCGCCG AGCTGGGCTA TCGCATCAAG TTGCTGGGTA TTGCGCGGCG CCGCGCGGAT
GGCGTCGAGT TGCGGGTCCA TCCGACCCTG ATTCCCCATA GCCACCTGCT GGCCAATGTG
GAGGGACCCT TCAACGCGAT TCTGGTGGAG AGCGATGCGG CGGGGCAGAG CCTTTATTAT
GGACGTGGCG CGGGCGGCGA TCCCACGGCC AGCGCCGTGG TGGCGGACCT GGTGGATGTG
GCGCGGACCA TGACCGCCGA TCCCAGCAAC CGGGTGCCCC ATCTCGCCTT CCAGCCCGAT
GCCATGAGTG CCTTGCCGCT GCTGCCCATG GCCGAGGTGG AGAGCGCTTA CTATCTGCGC
ATCCACGCCC ATAACCGTGC CGGTGTGCTG GCACAGGTGG CGACGATGCT GGCGGAATAT
GAGATTTCCA TCGAAGCGCT GGTACAGAAA GAGACGCCGG AGGCAGACAG TGTGCCCATC
GTCCTGCTGC TCCACCGCTG CCGGGAAGGC GACCTGGAGC AGGCAATCGC TCGCATGGAA
GCCCTGCCAG TGGTCGTTCA GCCCGTGCTG CGCCTGCGTG TCGAGAGTTT GGCGGAAGGG
TGA
 
Protein sequence
MAEDLAPVRI GILGMGTVGQ GTVRVLERNA EEITRRVGRE LRVVHAAVRN PARLEGLGLD 
ARISSDPWAV VRDPEVDVVV EVMGGQEPAL SLLMAAIAAG KHVVTANKAL LAEHGNEIFA
AAQARGVMVA FEAAVAGAIP IIKAIREGLA GNRIQWLAGI INGTSNYILS QMFREGWDFQ
QALAEAQRLG YAEADPGLDV DGGDAAHKIT LMASIAFGIP VDFAHCHVEG IRALERTDVV
YAAELGYRIK LLGIARRRAD GVELRVHPTL IPHSHLLANV EGPFNAILVE SDAAGQSLYY
GRGAGGDPTA SAVVADLVDV ARTMTADPSN RVPHLAFQPD AMSALPLLPM AEVESAYYLR
IHAHNRAGVL AQVATMLAEY EISIEALVQK ETPEADSVPI VLLLHRCREG DLEQAIARME
ALPVVVQPVL RLRVESLAEG