Gene Lferr_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0568 
Symbol 
ID6876530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp530684 
End bp531883 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content62% 
IMG OID642788451 
ProductArgininosuccinate synthase 
Protein accessionYP_002219029 
Protein GI198282708 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGA AAGTCGTTCT CGCCTATTCC GGTGGTCTGG ATACCTCGGT CATCCTCAAG 
TGGCTGCAGG ACCAGTACCA GTGCGACGTG GTCACCTTCA CCGCCGACAT CGGCCAGGGT
GAAGAACTGG AACCGGCGCG CGCCAAGGCC GAGAAGCTCG GCGCCAGGGA AATCTTCATC
GACGACCTGC GCCAGGAATT CGTCCGGGAT TACGTGTTCC CCATGTTCCG CGCCAACACC
CTCTACGAGG GCGAGTATCT GCTGGGCACC TCCATCGCCC GGCCCCTCAT CGCCAAGCGC
ATGGTGGAAA TCGCCGCCGA CGTGGGTGCC GATGCCGTCG CCCATGGGGC CACCGGCAAG
GGCAACGATC AGGTCCGGTT TGAGCTGGGG GCCTACGCCC TCAACCCCGA TATTCAGGTC
ATCGCCCCCT GGCGGGAATG GGATCTGAAC TCCCGTGAAA AGCTCCTCGC CTATGCCGAA
CAGCGTGGCA TTCCGGTGGA ACGCCATGGC CAGAAATCCC CCTACTCCAT GGATGCCAAC
CTGCTGCATA TTTCTTATGA AGGCGGCATT CTCGAAGACC CCTGGGCGGA AGCCGAAGAC
GGCATGTGGC GCTGGACCAC GGCGCCGGAG CAGGCGCCAG ACCGGCCCCG TTATCTGGAA
ATCACCTACG CCCACGGCGA CCCCATCGCC ATCGACGGCG AGCCGCTCAA TCCCGCGCAG
TTGCTGGCGC ACCTCAATAC CGTTGGCGGC GAGCATGGCA TCGGGCGCCT GGACATCGTC
GAAAACCGCT ATGTCGGCAT GAAATCCCGG GGCTGCTACG AGACCCCCGG CGGCACCATT
CTGCTCAAGG CCCATCGCGC CATCGAATCC ATCACCCTGG ACCGGGAAGT CGCCCACATC
AAGGATGAGC TCATGCCGCG CTACGCCAGC ATCATCTACA ACGGCTTCTG GTGGAGTCCG
GAGCGCCGCG CCCTGCAGAC GCTCATCGAT CAGAGCCAGC GACTGGTCAA CGGCGTGGTG
CGCCTCAAAC TCTACAAGGG GGGGTGTATG GTGGTGGGAC GGCAGTCGCA GGAGAGTCTC
TTTGACCCAC GTATCGCCAC CTTTGAAGAT GATGCGGGCG CCTACAATCA GAAGGATGCC
GGGGGCTTCA TCAAGCTCAA TGCGCTGCGT CTGCGCATCG AAAAGCGTTT GCAGGGTTAA
 
Protein sequence
MVKKVVLAYS GGLDTSVILK WLQDQYQCDV VTFTADIGQG EELEPARAKA EKLGAREIFI 
DDLRQEFVRD YVFPMFRANT LYEGEYLLGT SIARPLIAKR MVEIAADVGA DAVAHGATGK
GNDQVRFELG AYALNPDIQV IAPWREWDLN SREKLLAYAE QRGIPVERHG QKSPYSMDAN
LLHISYEGGI LEDPWAEAED GMWRWTTAPE QAPDRPRYLE ITYAHGDPIA IDGEPLNPAQ
LLAHLNTVGG EHGIGRLDIV ENRYVGMKSR GCYETPGGTI LLKAHRAIES ITLDREVAHI
KDELMPRYAS IIYNGFWWSP ERRALQTLID QSQRLVNGVV RLKLYKGGCM VVGRQSQESL
FDPRIATFED DAGAYNQKDA GGFIKLNALR LRIEKRLQG