Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0564 |
Symbol | |
ID | 6876526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 528691 |
End bp | 529437 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788447 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_002219025 |
Protein GI | 198282704 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGA GGCAGGTGGT GTTGGATACG GAAACTACGG GCATCGATTG GAAGCAGGGG CACCGGGTGA TCGAAATAGG TGCCGTGGAG CTGATCGACC GGCGGGTGAC GGAGGCGTAT TACCAGCAAT ACCTCAATCC GCAGCGCAGC AGCGATCCCG AGGCGTTGCG GATACACGGA CTGACCGACG AATTTTTGCA GGATCAGCCG GGTTTCGCGG AGGTGGCGGA CGCGTTTCTG GAGTTTCTCG GTGACGCGGA GCTGATCATT CACAACGCGC CCTTTGACCT GGGATTCCTG AATCACGAAC TGCAACTGGC CGGGAAGGCG CCTTTGCGGC AGGCCGTAAT GGATACGCTG GCCGATGCGC GCCGCCGTCA TCCCGGTCAG AAAAATGATC TCAACAGCCT ATGCCGGCGT TACAGTGTGG AAAACAGCCA TCGTGAACTG CACGGGGCCT TGCTGGACAC CCGGATACTC GCCGAGGTCT ACCTGGCGAT GACCGGCGGG CAGGTGGATA TGATGGGGAT GCTGGGTGCC GCAGGTGGCT CCGCCGCAAC GGAGATGCGG TCCGCGGGGG ATGACCGTCG GAGCGAGGGC ATTCCGGCGG CATTGTCGCG GCCACGTGGC CCATTGCGGG TGATCCGCGC CAGCGCGGAG GAGTGCATGC TCCATCGGCA ATATTTGCAG AATATGGGTG GTAACGCGTT ATGGGAGCCG GAAAGCGAGG GCATTCCACC GGCTTGA
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Protein sequence | MAVRQVVLDT ETTGIDWKQG HRVIEIGAVE LIDRRVTEAY YQQYLNPQRS SDPEALRIHG LTDEFLQDQP GFAEVADAFL EFLGDAELII HNAPFDLGFL NHELQLAGKA PLRQAVMDTL ADARRRHPGQ KNDLNSLCRR YSVENSHREL HGALLDTRIL AEVYLAMTGG QVDMMGMLGA AGGSAATEMR SAGDDRRSEG IPAALSRPRG PLRVIRASAE ECMLHRQYLQ NMGGNALWEP ESEGIPPA
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