| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0547 |
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| Symbol | |
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| ID | 6876503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 505685 |
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| End bp | 506377 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788424 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_002219008 |
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| Protein GI | 198282687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.117593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000046415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAGC ACCCCCTGGT CGTGACTGAC CGTTTGCGCC TCAGGCGCGA CCCATCACGG
GCTTCGGGCC TGGCTCGCTG GTTTCTGGTG CCGCTGCTGA TTTTGGGCGG TATCCAGCTC
GCGGCTGCCG CCACGGGTCT GGCGATGTTG CAGGATTTTT TCCAGAAAAC CCACACCATC
ACGGCCCAGT TCCGTCAGGA AGTAGCCAAC CATGACGGCC GGATCGTCAA GCGTACCAGT
GGCAAGCTGT GGATTTCCCG CCCCGGCAAA TTCCGCTGGG ACTACGACGG CCGTAACGGG
CAAACCATCG TGTCCAACGG TGAGAAGGTC TGGCTTTATG AACCGGCTCT GGAACAGGCC
ACGGTGCAGC CCCTCGGCAA AGCTATCGGG TCCACCCCTG CGGCGCTGAT CGCGGGTAAC
GATGACCTTG GCCGGCGCTT CAGGATTACA GACCTGGGCG AAAAAGACGG ACTCCGCTGG
CTGCTGTTGC ATCCCAAAAC GGGGCAGGAT CAGGGCTTCA CCGCGTTGCG CCTGGGCTTT
GATGCACAGG GCGCGCTGCG CGAGATGCGC ATGGAAGACG CTTTCCAGCA ACAGACCGTC
CTCCGCTTTG AGCATATCAG GATCAATCAC CCCATTTCGG CGCAGGAGTT TCAGTTCACC
CCGCCTGCCG GCGTAGATGT TCTCTCTCAA TAA
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| Protein sequence | MQQHPLVVTD RLRLRRDPSR ASGLARWFLV PLLILGGIQL AAAATGLAML QDFFQKTHTI
TAQFRQEVAN HDGRIVKRTS GKLWISRPGK FRWDYDGRNG QTIVSNGEKV WLYEPALEQA
TVQPLGKAIG STPAALIAGN DDLGRRFRIT DLGEKDGLRW LLLHPKTGQD QGFTALRLGF
DAQGALREMR MEDAFQQQTV LRFEHIRINH PISAQEFQFT PPAGVDVLSQ
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