Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0543 |
Symbol | |
ID | 6876499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 501048 |
End bp | 501524 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642788420 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_002219004 |
Protein GI | 198282683 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.166066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000593111 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGCTC CGGTAACCAT CGGCCGTTTG GCGCGTGAAG CAGGGCTTGC CGCAGAGACC TTGCGTTACT ATGAGCGGAT CGGGCTCATT CGGCCTGTGC AGCGGACCCC GTCCAACTAT CGGCTCTATG ACGGTGAAGC CGAAGCGCGG CTGCGTTTTA TCCGGCGTGC CCAGAATCTT GGCTTTTCCC TGGCAGAAGT GAAAGAACTG CTGGATATCA GCGGCAGTGC GGAGAACGAC ATGGGCGAGA TCAAAGCGCT CACCGTGCAG AAACTTGCCG AGATCGATCG CAAGATCGCC GATTTGCAAA GAATGCGCAC GGTCCTTGCG CAACAGGTCG ACTGCTGCCC CGGCCATGGC CGGGTGGCTG ATTGCCCGAT TCTCGCGTCT CTGGCCGATG CAGAAAACGC CTTGCCTGTC GGGGAGCGTT GGGGGCGGCG GGATACCCGG ATACCCTGCA ACGCGGCGCT GGGCTGA
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Protein sequence | MEAPVTIGRL AREAGLAAET LRYYERIGLI RPVQRTPSNY RLYDGEAEAR LRFIRRAQNL GFSLAEVKEL LDISGSAEND MGEIKALTVQ KLAEIDRKIA DLQRMRTVLA QQVDCCPGHG RVADCPILAS LADAENALPV GERWGRRDTR IPCNAALG
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