Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0534 |
Symbol | |
ID | 6876490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 490241 |
End bp | 490825 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642788411 |
Product | phosphoribosyltransferase |
Protein accession | YP_002218995 |
Protein GI | 198282674 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0649292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000263793 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACGACGT GGTCACCTTT ACCTACTAGT GCCATTATGA CACCTACCCA TTTAGGGCCC GCTGAGCATC TGTTCAGCGC GGAAGAGGTG GAGACGGCCA TCCAGCGGAT GGCCGTTGCC ATTAATGAAG AGATGGAACA TCTGACGCCG CATCGTCCGG TGGTATTGCT TTGCGTGCTG ACGGGTGCCG TCGTGGTGGT CGGCCAGTTG ATGCCGCACC TGCGTTTTCC CCTGGTGCTT GATTGTGTAC AAGTCGGTCG CTATGGTGCC GAAACCAATG GTGGTGTCTT GCAGTGGCGC ATGCGCCCCA AGGAATCACT GGCAGGTGCG GTGGTTTTGC TGGTGGACGA CATCCTTGAC GAGGGCGTGA CCCTGCAAGC TTTGCAGGAA TATTGCGTGG TGGAGGGCGC TGCCGCCGTT CATACGGCGG TGATGGTGCG AAAAACCCGT TCCCGCGCGA TCGAGGTACG AGTGGACTAT GTGGGGTTGG AAGTGCCGGA TCGTTTTGTG TTTGGGTACG GGCTGGATGC CCGCGGCCTG GGGCGGAATG CACCGGGTAT TTTTGTTTTG CCGGAGGACG GCTGA
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Protein sequence | MTTWSPLPTS AIMTPTHLGP AEHLFSAEEV ETAIQRMAVA INEEMEHLTP HRPVVLLCVL TGAVVVVGQL MPHLRFPLVL DCVQVGRYGA ETNGGVLQWR MRPKESLAGA VVLLVDDILD EGVTLQALQE YCVVEGAAAV HTAVMVRKTR SRAIEVRVDY VGLEVPDRFV FGYGLDARGL GRNAPGIFVL PEDG
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