| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0515 |
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| Symbol | rpmD |
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| ID | 6876471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 479316 |
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| End bp | 479501 |
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| Gene Length | 186 bp |
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| Protein Length | 61 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642788392 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_002218976 |
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| Protein GI | 198282655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0181031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000137591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC ATCTGCGTAT CACGCTGGTA AAAAGTTTGA TAGGCGTTGC TGAGAAACAT
CGTCGGGTCG TCGCCGGCCT GGGCTTGCGC CATACCCATC ACTCGGTGGA ACGTTTGGAT
ACTCCGGAGA TTCGAGGGAT GGTAAACAAG GTTCCTTATC TGCTTCGCTG GGAAGAGCTG
TCATGA
|
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| Protein sequence | MSKHLRITLV KSLIGVAEKH RRVVAGLGLR HTHHSVERLD TPEIRGMVNK VPYLLRWEEL
S
|
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| |