| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0497 |
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| Symbol | rplC |
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| ID | 6876453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 471417 |
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| End bp | 472049 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642788374 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_002218958 |
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| Protein GI | 198282637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.443535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000471094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTAATGG GCCTGATCGG ACGGAAAGTA GGTATGACGC GCATCGTTGC AGGCGATGGG
CGTGTGCTGC CGGTAACCGT CATTCATGTG GCGCCGAATA CGGTGGCACA GGTTAAAGAT
ATCGCCACGG ACGGTTACTG TGCAGTGCAG GTGGCAACCG GTACGCGCCG TCCACAGCGG
GTAACTTCTG CTTTGGCAGG ACACTTTCGT AAAAATGGCA TTGCTCCCGG GCGGCTATTA
CGGGAATTCC GCGTGGCAGA TACCGCCAAT TATGCGTGCG GTATGGACAT TGATCTGGAC
ATCTTCGCTG AAGGGCAGCG CGTGGATGTG TCGGGCGTGA GCAAGGGAAA AGGCTTCGCC
GGCGCTATCA AGCGCCATAA TTTCCGGAGT AACCGCGCGA GTCATGGTAA CTCCCTGTCC
CACCGTGCAC CGGGATCCAT CGGTTGTCGC CAGACGCCGG GCCGCGTGTT CAAGGGCAAG
AAAATGGCCG GACACCTGGG CGCAGAACAG GTCACAACAC TCAATCTCGA GTTGGTACGC
ATCGATGCCA ATCGTCGCCT GCTCATGATC AAGGGTGCCG TCCCTGGTGC GCGAGACGGT
GACGTGATGA TTCGTCCCGC CGTGCGTGGT TAG
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| Protein sequence | MVMGLIGRKV GMTRIVAGDG RVLPVTVIHV APNTVAQVKD IATDGYCAVQ VATGTRRPQR
VTSALAGHFR KNGIAPGRLL REFRVADTAN YACGMDIDLD IFAEGQRVDV SGVSKGKGFA
GAIKRHNFRS NRASHGNSLS HRAPGSIGCR QTPGRVFKGK KMAGHLGAEQ VTTLNLELVR
IDANRRLLMI KGAVPGARDG DVMIRPAVRG
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