Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0449 |
Symbol | |
ID | 6876401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 423949 |
End bp | 424446 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642788322 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_002218910 |
Protein GI | 198282589 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000279519 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACAAT CGGTAGTGGG TGTGGTGATG GGCAGCGAAA GTGACTGGGA AGTGATGCGT GCCGCGGTGG AACATCTGCA GGCGTTGGCC ATTCCCTGCG AACAGCGTGT CGTATCCGCA CACCGCACGC CGGACCTCCT TTTTGACTAT GCGGCTGGTG CCGCGCCACG GGGGCTGCGA TGTATCATTG CCGGCGCTGG CGGCGCTGCG CACCTGCCCG GCATGCTGGC GGCCAAGACC ATCGTGCCGG TGCTGGGCGT GCCGGTGCCC TCCCGGCATC TGCAAGGCCT GGATTCTCTA TTGTCTATCG TGCAGATGCC AAAGGGGGTG CCGGTGGCCA CCTTTGCCAT CGGCGCAGCG GGTGCTGCCA ATGCTGCCCT CTTTGCTGCC GCGATGCTGG CTGGTGCCGA TGCGGCGCTG GCCCGGCGCC TGTTGGATTT TCGCGCGCGC CAAGAGACTG CAGTGATGGC CATGACCTTG CCGGAGACCG GCCTTTGA
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Protein sequence | MEQSVVGVVM GSESDWEVMR AAVEHLQALA IPCEQRVVSA HRTPDLLFDY AAGAAPRGLR CIIAGAGGAA HLPGMLAAKT IVPVLGVPVP SRHLQGLDSL LSIVQMPKGV PVATFAIGAA GAANAALFAA AMLAGADAAL ARRLLDFRAR QETAVMAMTL PETGL
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