Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0439 |
Symbol | |
ID | 6876391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 414812 |
End bp | 415639 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642788312 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_002218900 |
Protein GI | 198282579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000148938 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACCCC AGAATATTGT CTTCATTGGT GCCGGCAATA TGGCTCGCGC CCTCATCGCC GGTCTGCGAC GTCAGGGCAT TGCAGGCGAG CAGATTCAGG TTCATGCCCC CAGCAGTGCA CACCGTGACG CACTTGCCGA AGAGTTCGGC ATCCGCAGTC TGGCGGCAAC GGCTCAAAGT CTGCCTGCCA ACAGCGTGGT CATCTACGCA GCCAAACCAA AGCAGATATC CGCGGTGCTT GCGCTGTGGC GACAGGCCTT CGCCGATGCC GGGGTGCTCT TCCTCTCTGT GGCTGCCGGC ATCGACAGCG CACGCATTGC CGCCGAACTG AACCCCGGGA GCGCCATCGT GCGCGGTATG CCCAACACCC CGGCACAAGT CGGTGCCGGA GCGACGGCCC TGTATGCCCG CGATTCGGTG AGCGCCGCGC AACGCCAGAC TGCCGGGTTT ATCATGTCCG CCGTGGGCGA GATTTACTGG CTGAGCGATG AATCGCTGAT GGACGCTGTT ACGGCACTAT CCGGAAGCGG CCCTGCCTAT GTCCTGCTGT TCCTGGAAGC CCTTGAAGAT GCCGCCGTGC TGCAGGGCCT GGACCGTGCC ACTGCGCGCG CCCTCGCCCT GCAGACGGTG CTCGGCACCG CACAGATGGC GGCCGCCAGC ACCCTCAGTC CGACCGCGTT ACGCCATCAG GTCACCAGTC CGGGTGGCAC CACGGCGGCG GGTTTGGCGG TCTGGGAAGA GCACCTGCGG CCACTGGCGC AGCGGGCCCT GGCCGCCGCG GCGGAGCGCA GCCGCGCTCT GGGCAGCCCG GAAAAGGATA TACCATGA
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Protein sequence | MIPQNIVFIG AGNMARALIA GLRRQGIAGE QIQVHAPSSA HRDALAEEFG IRSLAATAQS LPANSVVIYA AKPKQISAVL ALWRQAFADA GVLFLSVAAG IDSARIAAEL NPGSAIVRGM PNTPAQVGAG ATALYARDSV SAAQRQTAGF IMSAVGEIYW LSDESLMDAV TALSGSGPAY VLLFLEALED AAVLQGLDRA TARALALQTV LGTAQMAAAS TLSPTALRHQ VTSPGGTTAA GLAVWEEHLR PLAQRALAAA AERSRALGSP EKDIP
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