Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0398 |
Symbol | |
ID | 6876350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 375880 |
End bp | 376500 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642788271 |
Product | Glutathione S-transferase domain |
Protein accession | YP_002218859 |
Protein GI | 198282538 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.165939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.123126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCC CCAGCAGCAA AAAAACCCTC ATGACGCTCT ACTCCAGCAA CGATTGTGTC TTCGCGCACC GTGTGCGTTT CGTGCTGGAA GAGAAGGCTA TGGAATACCA GATCATCGAC GTCGATCTCG GCAACCGGCC CGAAGACCTT GCGGAACTCA ATCCCTACAA CCAAGTGCCG ACCTTGGTGG ATCGCGATCT GGCCATTCAC GAATCGGTCC TGATCATGGA GTACCTTGAC GAGCGGTTCC CCCATCCGCC ACTGATTCCG GTAGACCCCA TATCCCGTGC CAAGGTGCGC CTGGGTCTCC TGCGTTTCGA CCGTGACTGG TTTGCACCGC TCTTTCAGCC CGGCTACGGT GCCGAGCAGG TCAAAACCGC CAAGGAACAG ATTCGCAGTA CCCTCGCCGG GCTGAACAGC ATCTTCAGCC AACAGCGTTA CCTCTTTGGT GACGACCTTT CGGTACTCGA CTGTGCTATC GCCCCACTCC TGTGGCGCAT GCCGGTACTG GACATCTCTC TACCCGCCGC AGCCCGTGCC ACCCAGAATT ATATGGATCG CATCTTCGGC ATGGAGAGCT TCAAACGCAG CCTGACGCCT GCCGAGAAGG CCATGCGCTG A
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Protein sequence | MATPSSKKTL MTLYSSNDCV FAHRVRFVLE EKAMEYQIID VDLGNRPEDL AELNPYNQVP TLVDRDLAIH ESVLIMEYLD ERFPHPPLIP VDPISRAKVR LGLLRFDRDW FAPLFQPGYG AEQVKTAKEQ IRSTLAGLNS IFSQQRYLFG DDLSVLDCAI APLLWRMPVL DISLPAAARA TQNYMDRIFG MESFKRSLTP AEKAMR
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