Gene Lferr_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0353 
Symbol 
ID6876304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp331913 
End bp332680 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID642788226 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002218814 
Protein GI198282493 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.740813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.996047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGC GCCTGTATAG CTGGAACGTG AACGGCTGGC GCGCCGCCTG TCGCAAAGGG 
TTGCGCGAAT GGGTCGCGAC GGTGCAGGCG GATGCGCTCT GCTTCCAGGA AATCAAGGCC
GACCCGGACC GCCTGCCGGC GACGGAAACC GCACTGGATG GTTACGATGC CCGCTGGGCG
GTCGCTGAAC GCCCGGGTTA CAGCGGCGTC GCCACCTTCA GCAGAGCGCC CTGCCGGCCG
CTGACAACGG GCCTGGGCAT CCCGCGCTTC GACCGGGAGG GGCGCGTGGT CGTCACCGAC
TGCGGTGATT TCGACCTGTA TAACGTCTAC TTTCCCAACG GCAAGAAGGA TACGGAACGC
CTCGCCTTCA AGCTGGATTT CTATGCCGCC TTCCTGGAAC TGATCAACGC GCGGGTCGCC
GCCGGCCGGG CGGTGGTATT CTGTGGCGAC GTCAACACCG CCCATCAGGC CATCGACCTT
GCACGCCCCA AAGAAAACGC GAGAATATCC GGTTTTCTCC CCGAGGAAAG GGCCTGTCTG
GACCAATGGG CAGCGGCGGG CTGGGTGGAC AGCTTCCGCC ACCTTCACCC GGATGCCGTG
GAGTATTCCT GGTGGAGTCA GCGCACCGAC GCCCGCGCCC GCAATATTGG CTGGCGCCTC
GATTATTTCT GGATACATGA GAGCCTGTTG CCGCGCCTGC GCGGAGCGGG GATCGCCACC
GATGTGACCG GCTCCGATCA TTGCCCGGTC TGGCTGGAGT TGGATTGA
 
Protein sequence
MAMRLYSWNV NGWRAACRKG LREWVATVQA DALCFQEIKA DPDRLPATET ALDGYDARWA 
VAERPGYSGV ATFSRAPCRP LTTGLGIPRF DREGRVVVTD CGDFDLYNVY FPNGKKDTER
LAFKLDFYAA FLELINARVA AGRAVVFCGD VNTAHQAIDL ARPKENARIS GFLPEERACL
DQWAAAGWVD SFRHLHPDAV EYSWWSQRTD ARARNIGWRL DYFWIHESLL PRLRGAGIAT
DVTGSDHCPV WLELD