Gene Lferr_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0348 
Symbol 
ID6876299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp325719 
End bp326552 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID642788221 
ProductSporulation domain protein 
Protein accessionYP_002218809 
Protein GI198282488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.647009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.768364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACT ACAAAAATCA GACCAGCCGC CCGCAAGTGC AGGAGCCGCG CCCGCCCGTC 
CCGCCACGAC AGCGGGTAAC TCCGGAAGAT GATGCCGAGG AAACACCGTC CCCTCGGGCA
CGGCACTGGC CCTGGGTGTT GCTGCTTCTG GTGATCGCGC TGAGTGCGGG GGTCTGGTGG
TGGATCGCAC AGATCCCCAT CGCCACCGGC AGGCCAGGCC TGTCCCGTAG CGGGACGGAA
GCATCGACGG CGGCGACATC CCGCAACAAC GCGGCGGCGA CCGGGCAGAA ACCGCCTGAC
AGCCCGGCAA CCACCCGACC GTCAGCACCC GTACCGATTA GCGCGGCTGC ACTCTCCTCG
CGGGGCGGCC CGCTCACCGT CGCCACCTCC GCTGCGGCTT CCGCGACCTC CACAGCCGCC
ACCCGCAGCG GCGTCGATTT CAATTTTTAT CAGATATTGC CCGCCATGCA TGTGGATATT
CCTGCCGACA TCCTCGGCAG CGGTCCCGGC ATCCCCAGTG CAGCGACCGC CAGCAGTACC
AGTGTCGTTC ATCAGCCGGT GACCATTCAG GTGGGCGCCT TCACCAACCG CGCCGCCGCC
GTCGTCCTGC GCGATCGCCT CGCCCTGCTG GGGGTCAGCA CCCAGATGGA AAAGGCGGAA
GCGGGCGATA ACAGCACCCT CTACCGGCTC CGCACCAACA CCTTCGATTC TCTGGCAGCG
GCCCAGCCCA CCCTTGCCAA AATCCGCGGC ATGGGCATCA CCCCGCTGCT GCTGGGCAGC
GGAATCATCG GCTCCGGGGT CAATGTACCG CTGTCGCAAT CTCCAGCGCC TTAA
 
Protein sequence
MRDYKNQTSR PQVQEPRPPV PPRQRVTPED DAEETPSPRA RHWPWVLLLL VIALSAGVWW 
WIAQIPIATG RPGLSRSGTE ASTAATSRNN AAATGQKPPD SPATTRPSAP VPISAAALSS
RGGPLTVATS AAASATSTAA TRSGVDFNFY QILPAMHVDI PADILGSGPG IPSAATASST
SVVHQPVTIQ VGAFTNRAAA VVLRDRLALL GVSTQMEKAE AGDNSTLYRL RTNTFDSLAA
AQPTLAKIRG MGITPLLLGS GIIGSGVNVP LSQSPAP