Gene Lferr_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0330 
Symbol 
ID6876281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand- 
Start bp313278 
End bp313826 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID642788203 
Producthypothetical protein 
Protein accessionYP_002218791 
Protein GI198282470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.197697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCATA ACCTTCTGCA GGATCCCAAA ATATTTCAGT GGTTGTACCG CGTGGATGAA 
GCCCTTGCCG AAGAAACCAG GACCACCCGG TGTGCCTGTG GTGGGAGGTG GCATCGGGCA 
GACTACCCGC GCAAGCCCAG AGGCGGTTTA CGGGATTTCA GAATGCAGTA TGCCTCGCGC 
TTCAGCTTCT GCTGCAGTCA CTGCCGCAAG CGCAGAACAT CCCCCTCTGT GCGGTTTTTC 
GGGCGCCGGG TCTATCTGGC CCTGGTGATT CTGCTGATGG CGGGTCGGCT GACCGCCAGA 
ACACCGGGTG CCCAGGCGGT TTGCGCTCTG CTCGACGTGC CCGGACGCAC CCTGCGACGC 
TGGCGGGACT GGTGGCGGCA GGACTTTCCC ATGACAGCTC TCTGGAAGGC GGAAGTCGCC 
TGCTATCTGC CGCCGGTCCA CCGGGAAGAT CTGCCACTCA GCCTGCTGAC CCGGTTTGCG 
GATCCACCCG TTGCTGCCGT GCTGGATGGC TTGGCGCTGC TCACGCCGCT GACGATCCGC 
CAGAGGTAA
 
Protein sequence
MCHNLLQDPK IFQWLYRVDE ALAEETRTTR CACGGRWHRA DYPRKPRGGL RDFRMQYASR 
FSFCCSHCRK RRTSPSVRFF GRRVYLALVI LLMAGRLTAR TPGAQAVCAL LDVPGRTLRR 
WRDWWRQDFP MTALWKAEVA CYLPPVHRED LPLSLLTRFA DPPVAAVLDG LALLTPLTIR 
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