| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0313 |
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| Symbol | |
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| ID | 6876263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 298560 |
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| End bp | 299945 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788185 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002218774 |
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| Protein GI | 198282453 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000316331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCATCA GCACCATCAT TCCCGCCCTG CGCGCCGCTC TCGATGCCGA GCGGGTGCGC
GACGATGCGG AAACCCTCGC CATCTATAGC CGCGACGATA CTCCGGGGAG TTGCATACCC
GTGATGGTGC TCTTCCCGCA CAGCCATGAG GAGGTGCAGG CGATTGTCAG CATTGCCCGC
CGCCATCGTC TGCCCCTTGT TCCGCGCGGA GCAGGTTCCG GGAATGTCGG CGGGGCACAG
CCGGTACCCG GCAGCGCCGT CGTCAGCTTT GAGTGCATGC AAAAAATCTG CGATTACAGC
GCGGTGGACC GTACCATCAC CGTAGAGGCC GGATGTGTCA CTGCCGCGAT CAGTGCCTAT
GTGCAGGCCG ACGGACTGTT TTATCCCCCC GATCCCGGCA GCAACCCCTA CTGCCGCATC
GGTGGCAATC TGGCCATGAA TGCCGGCGGG CCGCACGCCG TAAAATATGG CGTCACCCGC
GATTACGTAC TGGGCCTGCG TGCTGTCACC GGCACCGGCG AAACGCTGTG CTGCGGTGTT
CATACCAGCA AAGGTGTGGT CGGCTATGAC CTGACCCGTC TGCTGGTAGG CAGCGAGGGC
ACCCTTGCCC TCATCACCGA GGCCACCCTG CGCCTGCTCC CCCTCCCCTC GGCCCAGGCC
ACCCTGCGCG CCGTCTATGA CAATACGGCC AACGCCTGCG CGGCGGTGCA GCGGGTGATG
GCACAACACC ATACGCCCAG CGCCCTGGAA CTCATGGACC CCTACGCCCT GGCCGCAGTG
CGCGCCATGG GCGCCGCCAG GGATCTGCCC GAAGGCAGCA ACGCCCTGCT GATGGTCGAG
GTGGATGGCG AGGCGATCAC CATCCCCGAC CAGGTGCAGG CCATCCGCGC CGCTCTGGCG
GGCGAGGGAA GCCTGGAAAT CCTGGAGGCG ACGGACGCGG CGGCCGTCGC CGATCTGTGG
GCGGCGCGCA AATCCCTGTC CCCCGCCACC AAGGCCATGG CACCCCTCAA AATCAACGAG
GACGTGGTCG TGCCGGTCAG CCGCCTGCGC GAATTGCTGG AGGCCATAGA AGGGATCGCA
GCAGAACAGT CCCTGCATAT CGTCAGCTTC GGGCACGCCG GAAACGGCAA CCTGCACGTC
AACTTTCTGG TCCATCCCCA AGATGGCAAT GAAATGCGCC GTGCCAGGCA CGGCCTGCAA
AAGCTCTTTC AGGCCGTACT GACACTGGAT GGAACCCTCT CCGGCGAACA CGGCATCGGC
AGCAGCAAGC GCGCCTATGT CCCCCTGGAA CTGAGCCCGG AAAGCCTGAG CATCCAGCGC
GCCATCAAGC GGATCTTCGA CCCTGATGCC ATTCTCAACC CCGGCAAACT GCTCCCCGAG
ACCTGA
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| Protein sequence | MSISTIIPAL RAALDAERVR DDAETLAIYS RDDTPGSCIP VMVLFPHSHE EVQAIVSIAR
RHRLPLVPRG AGSGNVGGAQ PVPGSAVVSF ECMQKICDYS AVDRTITVEA GCVTAAISAY
VQADGLFYPP DPGSNPYCRI GGNLAMNAGG PHAVKYGVTR DYVLGLRAVT GTGETLCCGV
HTSKGVVGYD LTRLLVGSEG TLALITEATL RLLPLPSAQA TLRAVYDNTA NACAAVQRVM
AQHHTPSALE LMDPYALAAV RAMGAARDLP EGSNALLMVE VDGEAITIPD QVQAIRAALA
GEGSLEILEA TDAAAVADLW AARKSLSPAT KAMAPLKINE DVVVPVSRLR ELLEAIEGIA
AEQSLHIVSF GHAGNGNLHV NFLVHPQDGN EMRRARHGLQ KLFQAVLTLD GTLSGEHGIG
SSKRAYVPLE LSPESLSIQR AIKRIFDPDA ILNPGKLLPE T
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