Gene Lferr_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0308 
Symbol 
ID6876258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp294198 
End bp294512 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID642788180 
Producttransposase, IS4 
Protein accessionYP_002218769 
Protein GI198282448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00145188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000198477 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGGACG GCACCCTTCG TGAAGATTGC GCTTTCGGAC TCACCAGCCT CACCAAAGAT 
CGGACGACTC CTGAAAATCT GCTGGGCATC GCCCGGGGCC ATTGGGAGAT CGAAAACCGC
AACCATCATG TCCGCGATAC CACCTATCAC GAAGACCTCT CTCAAATCCG GACCGAAAAC
GGACCACATA TGATGGCGAC TCTACGTGGC CTCGCCATGA GCATCCTGCG TCTCATCGGG
GTGAAAAACA TCGCCCAGGC TGGCCGTGAC TTCGCCGCCA GCGCTCGCAA AACACTCCGC
CAGTTCGGTT ACTGA
 
Protein sequence
MKDGTLREDC AFGLTSLTKD RTTPENLLGI ARGHWEIENR NHHVRDTTYH EDLSQIRTEN 
GPHMMATLRG LAMSILRLIG VKNIAQAGRD FAASARKTLR QFGY