Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0294 |
Symbol | |
ID | 6876244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 278957 |
End bp | 281278 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788166 |
Product | ATP-dependent endonuclease, OLD family |
Protein accession | YP_002218755 |
Protein GI | 198282434 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0724498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTAC ATTCTCTTGC TTTCAAAAAC TTCCGGAGAT TGAAGGACGC ACGCGTCGAT TTCGCCGATG ACCTGACGAT CTTCGTCGGG GCTAATAACA GTGGGAAGAC TTCGGCCACT CACGCGATTG AGCTTTTCCT TTCGGGAGGT AAGGACAAGT TCACGGTTCA CGACTTTTAC GCGGGTTGCT GGGCCGACTT CGAGAACTTT CCAGCCGAAG GCGCGATCGA CGCGAAGGTC GAATTTCCGG CCATATCCCT TGATGCCTGG ATCAGCGTAG ACGCAGACAA TCTCTATCGC GTGGTCGAGT TGCTGCCGCG CGCCGCTTGG GAAGGATCGC TGGTCGGACT TCGGATCGAA TTCGCGGCCA AGGATGCCGC ACAGACACTC GCGAACTTCA GGGCGAAGGC GACTAAAGTA GCCAAGTTTG CGAAGACCAA GGAAAAAGAC GGGCAGGACT ACAAGCCTTG GCCGCGCAAC ATGCGCGACT ATCTCTCCCG AGAACTGAAG AACGAGTATA GTCTGCGCTA CTTCATCCTG GACGAGGCGC AGCTCAAGGA GGAAACCGCC GACGCGGCCT ATACGCCCAA AGAGATCATC GGTGATGCCG AGCGATCTGG ACACACCGTC ATCAACTCGC TGATCAAAGT CGACTTCCTT AGCGCGCAGC GCCACCTGAG CGATGGGAAC GCTCAGGCAA GAACGGAAGA CCTCTCGAAA CGGCTGAGCC GGGTCTACAC CCGCAATCAG AAACAACGGG AAGACGATCA CAACGCGCTG AGAGCCCTCG CGCTCTCCGA GGACCAGCTC ACCAATCACT TTGCCGAAGT ATTCAGCGAC ACATTCAAGT CGCTCCGCAA GCTTGGCTAC CCAGGTCTGG CAAACCCTAC CCTTGAGATA CGCGCGGCGC TCAAGCTGGA GCGCCTCATG GGCGACCAGC AGGCGAAAGT TCACTACCTC CTCGAAGAAG CAACTGCCGA AGTGGAAGCT CTCGCGCTCC CTGACAGCTA TAATGGGCTT GGGTTCAAGA ACCTCATCTA TATGGGTGTT GAACTCCTAG ACATTCATTC GGCTTGGTCC TCCACCGAGG AGGGCGAGGA AGACAAGCGA CAGCCTATCC ATCTCATTTT CATCGAGGAG CCGGAGGCGC ACATGCATGC CCAGCTCCAG CAGGCATTCG TGCGCAAGCT GACCGATCTG ATCTCACCCA CGGGTGATGA CGGCTATGCG ACACAATTTG TGATCACTAC ACACTCGCCG CACATTCTCT ATGAGCGTGG TTTCCAGCCT ATCCGTTATT TCAGACGCTC GCCGGAGACC GGCGCGAAGC AGAGCTCAGC CGTTTTCAAC CTGTCGGTCT TTTACGATCA GAACGAGCCC GACCGGGATT TCCTTCAACG CTACATGAAG CTGACACATT GCGACCTCTT CTTCGCGGAT GCGGCCATTT TGGTCGAAGG GAACGTTGAG CGTCTCGTCC TGCCGCTGAT GATTACGCAG GGCGCCAAGA AGCTCAGCGC GGCCTATCTG AGTATCCTCG AAGTGGGCGG CGCTTTTGCC TACCGATTCC GCAAGCTGAT CGAGTTCCTC GGACTGACGA CACTGATCGT GACCGACCTC GACAGCGTGC ATCCAGCATC GCCGAAGAAG CAAGAAGAAG CAGTGGCAGG AGACGGCGCG GCCGCCGAAG CGGCGGAAGA CGCTGAAGAA GAGGATGAGG ATGGGGGCCA AGACGCAGAA GGTGAGAAGA AACCCAAGCC AAGGTCGAAA TGTCCCGCCG ACACACCCGG TGCAATCACG GCGAACCAGA CTCTGATCCA GTGGCTTCCC GGCAGGTCAT TGATCGATGA TCTCCTGGTT GCGTCGCCCG GCGACAGACT TCGGTCTCCT ACGGTGGATG GCGGCGCACA TGTCATGGTT ACCTATCAAT GCCCCGTAAA TGCGACATGG GGCGCGGATA CGCTCGAACT CAAGAGTCGT ACGCTTGAGG AGGCATTCGC CTATGAAAAT CTCGCCTGGT GCCAAAAGGG GGAGCATCGC GAGGTCGGGC TCTTCTGGGC CAAATCGCCC ACTATGTCGC TCGAAGATCT TGCCGCCAAA ATCCACAAGC GGGTGAAGGG GGAAAACTTT AAGAAGACGA ACTTCGCGCT AGGACTCCTT GCTAGCAGCG ATGTGAGCTG GGTTGTTCCC ACCTATATCC AAAAGGGGCT CGACTGGCTC ACGACCCATG TCGCGCTCAC TGACGAGACG AACGAGAGCG CCGCCGCGAA GCCGGAGCCT GATTCTGACG CTGCCCTCAA CGCAGATGAG GCTGCAAAAT GA
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Protein sequence | MYVHSLAFKN FRRLKDARVD FADDLTIFVG ANNSGKTSAT HAIELFLSGG KDKFTVHDFY AGCWADFENF PAEGAIDAKV EFPAISLDAW ISVDADNLYR VVELLPRAAW EGSLVGLRIE FAAKDAAQTL ANFRAKATKV AKFAKTKEKD GQDYKPWPRN MRDYLSRELK NEYSLRYFIL DEAQLKEETA DAAYTPKEII GDAERSGHTV INSLIKVDFL SAQRHLSDGN AQARTEDLSK RLSRVYTRNQ KQREDDHNAL RALALSEDQL TNHFAEVFSD TFKSLRKLGY PGLANPTLEI RAALKLERLM GDQQAKVHYL LEEATAEVEA LALPDSYNGL GFKNLIYMGV ELLDIHSAWS STEEGEEDKR QPIHLIFIEE PEAHMHAQLQ QAFVRKLTDL ISPTGDDGYA TQFVITTHSP HILYERGFQP IRYFRRSPET GAKQSSAVFN LSVFYDQNEP DRDFLQRYMK LTHCDLFFAD AAILVEGNVE RLVLPLMITQ GAKKLSAAYL SILEVGGAFA YRFRKLIEFL GLTTLIVTDL DSVHPASPKK QEEAVAGDGA AAEAAEDAEE EDEDGGQDAE GEKKPKPRSK CPADTPGAIT ANQTLIQWLP GRSLIDDLLV ASPGDRLRSP TVDGGAHVMV TYQCPVNATW GADTLELKSR TLEEAFAYEN LAWCQKGEHR EVGLFWAKSP TMSLEDLAAK IHKRVKGENF KKTNFALGLL ASSDVSWVVP TYIQKGLDWL TTHVALTDET NESAAAKPEP DSDAALNADE AAK
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