Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0235 |
Symbol | |
ID | 6876185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 219948 |
End bp | 225098 |
Gene Length | 5151 bp |
Protein Length | 1716 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788111 |
Product | domain of unknown function DUF1738 |
Protein accession | YP_002218700 |
Protein GI | 198282379 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCC CCGCCTCACC CCGTTCTGGG AACAACACCG ATAGGAAAGA TCCCCGTCTT GAGCTTGCCG ACAGACTGAT TGAACAGATC GAGGCAGGAA CTGCCTCCTG GCAAAGGCCC TGGGAAGCCG GCGATGTGTT GGCCCCGGTC AATGCAGTCA CAGGCAAGCC TTACAGCGGG GTGAACTACC AAAATCTCAT GATGTTCTCT CCGGACCCGT CCGATCCACG TTGGTGTACC TACAAGCAGG CCCGGGAGCA GGGCTGGCAG GTGCGCAAGG GTGAGCATGG GATTTCCATC GAAAAGTGGT CGCGTTACGA GCACAAACGC ACCAATGAGG AAATAGAGAG GCTTCGGGCG CAGGGCGCCC AGAACATCGA GCCCGTGGAG GAACGGCTTG GTGTCCGTTA CTACACAGTG TTTCACGCAT CACAGATAGA CGGCATTCCC CCGCTGGAGC GGTCCCCGCG TCTGGAGATC GAGGGAAAAC CCGATGATCG GCTGCCGAAG CTGGCGGAGA ATATGGGCCT GGAGGTGGTA CATACTGGCG GCCGGGCCTT TTATCGCCCC TCTGAGGACC GGGTATACAT GCCGCCGGTA GAGCGCTTCG AGCGCGCGAC GGGGCACGAC ACCACCCTTC TGCATGAGCT TTCCCATGGG ACAGGCCATG CATCCCGGCT GAATCGAGAG ATCCGGAATC CTTTTGGCAG CCCGAAATAT GCTGTCGAAG AGTTGCGGGC GGAGATGTCA GCGGCCATGA CCGCGGCGAG TTTGGGGATC GGCTTCGATC CCGCATCCCA GGACCTGGAA GAAGGCCGCG AGATGGGCAA TTCCGCAGCC TATCTCGCCT CATGGCTCAA AGCCCTGCCG GAAAAAGAGC GCAAGCAGAT CCTGATGCAG ACCATCAAGG ATGCCCAGGG GATCAGCGAC TATCTGATCG AACGGACGCC GGAATTGCTG GTGGAGCAGG AGCGACCAAC CGTCTCCCGT GGCGATTACG TCCGGTACAG GAATGAGATT GGGCAAGAGG TTGAGGGCGT GGTGCTTGAC GCCGCCCAGC CCGGCGAAGC GACGCGCTTG AGAGCCATCT ATCGGTGGCC CAACGGCACC CCCGGTATGG ACGGGGCGGA CCACATCGCG CCCACGGTAC TGCCGGACGG CTTGGTGGAA CACATCCCGG GCGCCGTCAC CCCCGGTCCG GATCTGGACG CCATCGATCC GCAGACCGAT GCGTACCAAC GCACCATGGG CATGGACGAT TCGCGTAACC GGGCGGGCCG CGCCGTGCTC ATGGCGGTCG AAACCGCGCG CGGGCAGCCG GAGCAGTCGG TAGCCTTGCA GGCGGCAGCC CTGCAGGCGG CGGCCTTGCC GGAACGCGCC CTGGACCCTG AGCTGATTTC GTTTCTTGAA AACCGCAACC GCGTCCGGCA AGGCGAACAC CCGGACTTTG CCGGCCTGAG CGATCCCGTC GCCAATGCCG AAGCCTTCGT TGAGCGGCAA GGCCGTACCT ATCCCCAGCG TTCCGCGCAA TGGGCCAGAG CGCTACAGGA AAGCCCGGTG GCTTATGGTG AGGCCGTGGG CCTCAGTCCG GCCACGGTGG GTCTCCTCGC GGCTCAGCTG AATGTGGGGG TGCAGCGCAT GGAACGGCCC CAGCTCGGCG ATCTCGTGCG TTTTGAGCCG CATGAGCCTG GCGTAACGAA CAGTCCCTTC TCGGGACGGA TCATCGCGGC CCTGGATACT TCTGGCGGCG ATATCCGCTA TCACCTGCGG GCGGAGACGG GGCTGGATCA GAGTATGGAG GCCCGTGTCT ATGGCCGGGA CGGACAGTTC CGCGAGATCG CTCTGGAGCA GGCCGTGGGA TTCGACCGGG CTCTCGCTCC AGAGGCAGAG AAAGCCCCCC AGATTCAGGT CGGGGACTTC GTGATCACAC GGAGAAATCA ATTCGGGGCA GACTGGAATA CTCCCTCCAT CGTTACCCGC ATCGATGACT CCGAAGTCCG GCTGCAGGAC CTCTACCGCT CCGGTCGGGA ATGGAAAGTC ACCCCCGCCG TCCGAACCAT GGCTCGCGAG GGTTTCGACG CGGCTCTCCG TCATCAGATC AGTGGCGTGG TGCCGCCCGA GATCGCGTCA GAAAAGCTGG ATTCTGCCTC CCGCAGGGAT CGCATCGCGA GTACGGTCAA TGCCTTTGAT GCCGAACACA GCCTGGCATA TGGCCAGCCG CCGGAGCCTG TGGCGAGGAT TCCCAACGAG GTGCGGCCAT TCCTTGGGGG CCAACAGGCG TCGGTGACAG CCCAGTTGCT CCGCAGCAGC GAGGAAAAAG GCTTTTTCTC GGACAAGATG CGGGAGTTAC AGGAGATCAT CCGGCAGATG CCGGCGACCT ATGAAACCGA CGGACTCCCC GATGCGGAGC GCCCGGTCTC CCTGCGCTAT TTTGGTTCCA ATGGTGCCCA GTGGTTCATC CTTGAGAAGG ATCGCGGAGA TCCGGCCAAT GAGGGGAACG GCTTCCCGAA CCAGACGCAA GCCTTTGGTC TGGCGGATCT GGGTATGGGC CATCCTGAAC TGGGATACAT CGATATTCCG GAGATCACCC GTGCCGGGGC GGAGCTCGAT TATCACTTTG AGCCCCGGAC CCTTTTGGAG GTGAAGCTGG AGCACTACCC AGACCTGCTT CCGCCAGAGC ATCGCCCAGT GGATCTGCGC AAGGAACAGG CGCTTCAGGA GTACCAGGCG TTTTACGCCC AGTTGCCACA GCGGGAAGAG AAACTGGTGA CGGCAGTCCG CGAGCGCTCT GGGCGCCTTG CTCCGGCGGA TTTTCGGGGC TTCTCCGACA TGATGCGGGA TTTCAGCAAG GGCGTGGATG ATACCTTTGG GATCATCCGG GAGGGAGAAA ACCGGGGAGC GTCGGCCCCG GAATTGCGCC TGACGCAGGC ATTTGCTCCG GAAGAGATCT CCGATCTGCC CGCCGTCCAA ACCGCCCGTG ACCGGGCAAG ACGGGTTGGC GAGCGATTTC ACGATCTGGA CCGGGAAATC CGGGACACCT TCAAGGCGCG GCTCAGGGAG CATGGCAAGG CACTACTGGA GTCCGGCAGC CTGCGCGAAC CCCGGGAAAT CGCGCAGGCG ACCTACTGGA AGCACGGGAT TGAGGCAAGT CCGGACAGCC CGATGATCGG AAAAGTGGTC GGGGCGATTC AGGACAAGGA TCTCAAAACC CTACTGGGAA TGATTGGCCA CAACAGCCAA AACCCGGGAT CGGAAGAGGT ATTTACGCAC ATTACGGGTG TAAAACTGGG CAAGACCCAA AAAGAACGGG GCGCACAGTT GCTGGAGTGG GCCGGTCCTG AAAAGGCGCA GGCCCTGCAG GAAAGCAATG CGCTGGCGGA GCGGGAACGG GAAGCTCGGG GCTTGCGGGA TGGCATGGTC AGCGCCTGGG CGGATCTGAA GGGCCTGCGC GTGGATGTCG GTGGCCAGGT GGTGAATGGA CAGGAGTATG TGACACTGAA AGTCGCGGGC GGCCAGGATC GCATTGCTTC CGGCAAGGAG GGCGCGGCAA CCACGTACCA TCTGATCAAT GACCGGGGCG AGTATTCCCG CGTCAAGGAC GTGCGGTTCA CGGCCTTTGC CAAGCGGGTT TTGGCCATGG ACGCCGATGG CAATGTGCGC AACGCCATGG AAAAGGCGGG CATTGTGCAG GGGATTGCGC CGGAAGGGGT TACCCCGAAA CCGGCTGCCG ATCTTCAGAA AGAGCAAAAA GCACCAGAAG CTCCCGGGAA GAACGCGTAC GAGCAAAAAA TCGAGGCGCG CAAGGAGCGA TATCTTGCCC TTTCTGAAAA GACCCGGGCG CGGGCGAAAG CCCGCATGGA GCAGGCCAGG CGCATGGCAG ACGCCATTCC TTTTGGTCAG CCGATCCTGG TTGGTCACCA CAGCGAAAAG CGCGATCGAA AGTTTCGTGA GCGCATCCAC CAGAACTTTG GCAAAGGCTT CGACCTGCTG GAGAAGGCAG CGTATTACGA ACGCCGCGCC AAGGGCGTCA ACGACTACGC CATCAGCGCG GACGATCCGG ATGCCGTGAA AAAACTCAGG GAACGGGTGG AGAATCTGAA GTCTTCCCAG GAGCGCATGA AGGCGGCGAA CGCCGCCATC CGCAAACATC AGAAGGATGG CCCCGAGGCG CAGCAGGCGG CCCTGGAGCG TCTGGGTTTC CAGCCAGACC AGGCAAAAGC CATTTTGACC CCGGATGTCA TGGGGACCGT GGGTTTTGCG TCGTACTCCC TCAGCAACAA TAACGCCAAC ATCCGGCGGC TGGAAGAGCG TATTCAGATC CTGGAAAAGG CCCAGGCCCT GAAGGACCGT GAGACACCGT ATGCCTGGGG AACGGTTCGG GAGAACAGGG AGATCAACCG CATCCAGTTC CGGTTCGAGG ACAAGCCTGA CGAAGAGGTC CGCAATCTCA TGAAGTCGAG CGGCTTTCGA TGGGCGCCTT CCGAGGGCGC CTGGCAACGG CAGTGGACGG GCAATGCCGT ATATGCCGCG CGGGATGTCA TCAAAAAGCT GGACGCGCTG ATGCCGCCTG AGCAGACGGT GGCAGCACCA GAACCGGCCC AACGGCTCGA CACTGTGCCA GTTTCCCAGA GCCCTGATGT GAGCCCAGGT ATTACTGTCC GCGACCCGAG CGCCGCGCTG TCTGCGGCCA TCAAGGACCG CGACGGCGAC TGGTACAACC TTTCCGTGCA GGAAAACGAT GGCCGTCTGG TGGGGACCTT GCAGTGGCGC GATGCGGAAA CGGGTCTGGT GGAGACGATG CCGTCCGGTG TTTTTCAGCC TGACGTGAAT TATGGGGTGG TGGCCAGGTT TGAGCGGGAG TCTGGGGAAC TCCTGGCGGT TGGCCTTTCC CGTGGTCTGG ATGGCGGTGT GGATATGAAG GTCTTTTCCC AGTCGAGGGA CGCCGCAGTC TTCGCCTGGC AGCGAATTCA TGAGTACCCG GGACATCTGA GGGCCAATGA AGCGCTCCAG AAGGTCCCGG ATCACCCGGA GGGTAAGGTG ATTGAGCAGG CTTTGGGCGT GGACCCGAAG ACGCTCAACC CGGCGCGTGT TGCCCCCAAG GCCTCAGCCC GCCGGCCGGA GCAGCAGAAG CAGCAGGGTG TGGAGATATA G
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Protein sequence | MSVPASPRSG NNTDRKDPRL ELADRLIEQI EAGTASWQRP WEAGDVLAPV NAVTGKPYSG VNYQNLMMFS PDPSDPRWCT YKQAREQGWQ VRKGEHGISI EKWSRYEHKR TNEEIERLRA QGAQNIEPVE ERLGVRYYTV FHASQIDGIP PLERSPRLEI EGKPDDRLPK LAENMGLEVV HTGGRAFYRP SEDRVYMPPV ERFERATGHD TTLLHELSHG TGHASRLNRE IRNPFGSPKY AVEELRAEMS AAMTAASLGI GFDPASQDLE EGREMGNSAA YLASWLKALP EKERKQILMQ TIKDAQGISD YLIERTPELL VEQERPTVSR GDYVRYRNEI GQEVEGVVLD AAQPGEATRL RAIYRWPNGT PGMDGADHIA PTVLPDGLVE HIPGAVTPGP DLDAIDPQTD AYQRTMGMDD SRNRAGRAVL MAVETARGQP EQSVALQAAA LQAAALPERA LDPELISFLE NRNRVRQGEH PDFAGLSDPV ANAEAFVERQ GRTYPQRSAQ WARALQESPV AYGEAVGLSP ATVGLLAAQL NVGVQRMERP QLGDLVRFEP HEPGVTNSPF SGRIIAALDT SGGDIRYHLR AETGLDQSME ARVYGRDGQF REIALEQAVG FDRALAPEAE KAPQIQVGDF VITRRNQFGA DWNTPSIVTR IDDSEVRLQD LYRSGREWKV TPAVRTMARE GFDAALRHQI SGVVPPEIAS EKLDSASRRD RIASTVNAFD AEHSLAYGQP PEPVARIPNE VRPFLGGQQA SVTAQLLRSS EEKGFFSDKM RELQEIIRQM PATYETDGLP DAERPVSLRY FGSNGAQWFI LEKDRGDPAN EGNGFPNQTQ AFGLADLGMG HPELGYIDIP EITRAGAELD YHFEPRTLLE VKLEHYPDLL PPEHRPVDLR KEQALQEYQA FYAQLPQREE KLVTAVRERS GRLAPADFRG FSDMMRDFSK GVDDTFGIIR EGENRGASAP ELRLTQAFAP EEISDLPAVQ TARDRARRVG ERFHDLDREI RDTFKARLRE HGKALLESGS LREPREIAQA TYWKHGIEAS PDSPMIGKVV GAIQDKDLKT LLGMIGHNSQ NPGSEEVFTH ITGVKLGKTQ KERGAQLLEW AGPEKAQALQ ESNALAERER EARGLRDGMV SAWADLKGLR VDVGGQVVNG QEYVTLKVAG GQDRIASGKE GAATTYHLIN DRGEYSRVKD VRFTAFAKRV LAMDADGNVR NAMEKAGIVQ GIAPEGVTPK PAADLQKEQK APEAPGKNAY EQKIEARKER YLALSEKTRA RAKARMEQAR RMADAIPFGQ PILVGHHSEK RDRKFRERIH QNFGKGFDLL EKAAYYERRA KGVNDYAISA DDPDAVKKLR ERVENLKSSQ ERMKAANAAI RKHQKDGPEA QQAALERLGF QPDQAKAILT PDVMGTVGFA SYSLSNNNAN IRRLEERIQI LEKAQALKDR ETPYAWGTVR ENREINRIQF RFEDKPDEEV RNLMKSSGFR WAPSEGAWQR QWTGNAVYAA RDVIKKLDAL MPPEQTVAAP EPAQRLDTVP VSQSPDVSPG ITVRDPSAAL SAAIKDRDGD WYNLSVQEND GRLVGTLQWR DAETGLVETM PSGVFQPDVN YGVVARFERE SGELLAVGLS RGLDGGVDMK VFSQSRDAAV FAWQRIHEYP GHLRANEALQ KVPDHPEGKV IEQALGVDPK TLNPARVAPK ASARRPEQQK QQGVEI
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