Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0221 |
Symbol | |
ID | 6876171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 206554 |
End bp | 208740 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642788097 |
Product | Tn7-like transposition protein B |
Protein accession | YP_002218686 |
Protein GI | 198282365 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.26166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACC TTTCGGTGGG TATGATCGTG GAGTGGATCA GCGAGCAAGA GGACCCCACG CCTCTGGTGG AACGCATTCT TTGGGTGAAC CCAACCGCAA TCGACCTGGT CAGCATCCAA TTGGATGAAC CGCTCGCTCT CCCCGTCTGG AAAAGGTTGG CGGATATAGA GGAGGCGCTA GCTAACGGTT CTGCCATCAT TCGGGTAGCG GATCCTTATG CGCATAGATT GCACCCGCCG GAGTCTTTTC TCCTCAAGCA TAGACAGCGT CGCGATGCTG CCTGGAAGGT CATAGAAGAT ATGGTGAGCC GCGTACCGGA TATTTACGAT GAGAATATCC GTGGCGGCTT GGTAGCTGAC GCGGCAAATC AGCACTCCGT TCACAAGATG ACGATCTATA AATATCTTCG CAGGTTCTGG TGGGGTGGTA TGGTGAAAAA TGCCCTTCTG CCGAGCTACG AACGCAGTGG AGGACCAGGC AAAGAAAAAT CTGCTAATAG TGCATCTAAG CGGGGACGAC CAACAAAGGC GACGGTGTTG CGGGATGCCC CGCCGGGAAT TAATGTCGAT GACAGCATCC GTAGAATATT TTCAGTAGCC TTTCGCCTTT ATGTTGATAC CAATAAAGCC CCTACACTGA AGCGCGCACA TTCCCTAATG CTGAGCAATT ATTTCAATGT TGGCTTTGAA GTAAAGGGGG GCGTGCGTGT ACCCGTTTTA CCACCCTCTC ACCAGCTACC CACATTGGAG CAATTCCGAT ACTGGTACAA GAAGCAGCAG GACATCGAAG CTTCGTTTAC CAAGAGAGAG GGCGCGAGAC GCTTTGCGCT CAAGCGGCGC CCTGTGCTGG GTAGTTCCAC GAAAATGGCC TTTGGCCCGG GTTCCATATA CCAAATCGAT GCTACCATAG CGGACGTATA CCTGGTGAGC AGCTTGAATC GGTCTCAAAT TATTGGCCGT CCAGTAGTGT ATGTTGTTAT CGATGCCCTG AGTCGCATGA TCACCGGACT ATATGTGGGG CTTGAAGGAC CGAGCTGGTT AGGTGCGATG ATGGCGTTAG CTAATGCGGC GAGCGATAAA AAGGCGTTTT GCAGCAAATA TGGAATCTCC ATATCGGATG AGGACTGGCC GTGCAAGAAT CTTCCTATGG AGATCCTTGC GGATCGCGGC GAATTACTGA GTAGGCACGC CGATGAACTG ACAGATTCGT TAAACATTAC GGTGGCGAAT GCGCCGCCCT TTCGTGCCGA CTGGAAGGGT ATAGTGGAGC AGCAGTTCCG AATTGCCAAT GAACGGGTGA TCCATTGGGT ACCTGGGGCC GTGCGGCGTG TCGCAAGAGA ACGTGGTGAT CTGGACTATC GTTTAGACGC AAAACTGGAT CTTAACGCGT TCACAGAAAT TATGATCTAT AATACGCTGA GTTATAACAA AATGCACTGG ATGGAATGGT ATCGCCATGA TGAGTTTCAA ATTCAGTCCG CGGTGGATCC TTTTCCGCGC ACCCTCTGGA ACTGGGGAAT TGAGCATCGT AGCGGATTCT TACGAACCCG ACCTCAGGAG GCCGTGTTGC TGGCCCTAAT GCCAAGAGGC GAAGCCTCCG TAACCCATTT AGGCATCAAA TGGCAGGGAT TATATTACAC CAGCGAGATC GCTGTTCGCG AACAGTGGTT CATACGTGCA AGGGCGACGC GCACATGGAA GGTTTCGGTG GCGTATGATC CAAGAAATAT TGAGATGATC TATATTATTC AGCCCAAAGG CGGTATTGAA GCTTGCCACC TACTGGAGAA GAATCAGGAC TTCGCGGGGT ATATGGTTGA GGAGGTGCAG GACTACGTGG CGGATCGCAA GCTCCGAAAA GCAGAGATCA AAACGGATAT TCTGCAAGAA CGGGCTGAGT TTATGGCCCA AGTAGATGCG GTTGTGACAG CGCAGGAAAA TCTGACTGAG GGTGCTGTGT CCACTGACCA GAGCAACCAT AAGCGTGTAA AGGATATCCG TCAGAATCGA CGGGAAGAAC GAGAACGTGT CCGGAAGGCG GAAGCATGGG AACTGGCGGA ACAGCCTGGT AAACCAAGGA AAATCGGCAG CAGTTCGCAG TCAAACGCAA GCGCTTCTTC GAGCACGGTT GAGTCGCGCA AAAGAGGGTT TTTAAATATC CTGAAGCAAA CGCGGAAGAG CGATTAA
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Protein sequence | MSNLSVGMIV EWISEQEDPT PLVERILWVN PTAIDLVSIQ LDEPLALPVW KRLADIEEAL ANGSAIIRVA DPYAHRLHPP ESFLLKHRQR RDAAWKVIED MVSRVPDIYD ENIRGGLVAD AANQHSVHKM TIYKYLRRFW WGGMVKNALL PSYERSGGPG KEKSANSASK RGRPTKATVL RDAPPGINVD DSIRRIFSVA FRLYVDTNKA PTLKRAHSLM LSNYFNVGFE VKGGVRVPVL PPSHQLPTLE QFRYWYKKQQ DIEASFTKRE GARRFALKRR PVLGSSTKMA FGPGSIYQID ATIADVYLVS SLNRSQIIGR PVVYVVIDAL SRMITGLYVG LEGPSWLGAM MALANAASDK KAFCSKYGIS ISDEDWPCKN LPMEILADRG ELLSRHADEL TDSLNITVAN APPFRADWKG IVEQQFRIAN ERVIHWVPGA VRRVARERGD LDYRLDAKLD LNAFTEIMIY NTLSYNKMHW MEWYRHDEFQ IQSAVDPFPR TLWNWGIEHR SGFLRTRPQE AVLLALMPRG EASVTHLGIK WQGLYYTSEI AVREQWFIRA RATRTWKVSV AYDPRNIEMI YIIQPKGGIE ACHLLEKNQD FAGYMVEEVQ DYVADRKLRK AEIKTDILQE RAEFMAQVDA VVTAQENLTE GAVSTDQSNH KRVKDIRQNR REERERVRKA EAWELAEQPG KPRKIGSSSQ SNASASSSTV ESRKRGFLNI LKQTRKSD
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