| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0185 |
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| Symbol | |
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| ID | 6876135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 175963 |
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| End bp | 177420 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788062 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002218651 |
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| Protein GI | 198282330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAT CAGGGGGCGC GGAGAAGGCG GCAACGGGGA AGGCGATTCG GAGGCCACAA
CGCCCGGTCC TGGCATTTTT CCTGTTGTCA CTCTTGAGCG CTTGCGCCAC CTATCACCCC
CAGCCGCTTT CTCCGGAACG GTCCGCCGCC GCATTCCAGG CGCGCAGCCT CGACGATCCG
AAATTGCGGG TTTTCCTCTC CGATTATGGC CGCACGCCGA AACACTGGCC CAAGCAACAC
TGGAATCTGG ATGATCTGGT CTTGGTGGCC CTCTATGAAA GCCCCGAGCT GGCTGTCCAG
CGCGCCCGAT GGCAAGTGGC CCGCGCCAAT GTGGTCACCG CCGGGCAGCG CCCCAATCCC
AGCATCGGCT TTCTTTCCCA GCACCACAGC ATTGCACCGG AAGGCGTGTT GCCCTGGACG
CTCGGTTTTT CCTTCGACAT ACCGATCGAA ACGGCCGGCA AACGCGGCGA TCGCGTCCAA
GGTGCCCTGG CTTTGGCCGA CGCCGCGCGG TTCCAGGTGG GGGAAAGCGC ATGGCAGGTG
CGGGCACTGG TCCGCCAAAG GTTCCTGGAT CTGTTTGCGG CCATAGAGCA AATCAACGTA
CTCAAGGCCG AAACGGCGGT GCGCAGGCGA ATGCTGAAAC TGGTGGAACA ACGTTTCGCC
GCCGGCGAGA GTTCCGCATT TGCGGTCAAC ATCATCCAAC TGGATTGGCA ACGGACGCAG
ATGGCGCTCG CCACCGCCGA GGCGCACGCC GCCAGTGCAC GAGCCGCATT AGCCCAGGCG
CTGGGCCTGC CGGTGGGTGC CATTGCCGTT CTGCGTTTCG ACTTCACGGA CATGAACCAG
CCCCTTGCAG GGAAATACCC GCCCCTAGCC ACCCTGGAAC GGGCGGCCTT GCGCCATCGC
CTGGATCTCC GGGCGGATTT GGCCCGGTAT GCCGCCGCCG AGGACACCCT CAAGCTCGAA
ATCGCAAAGC AATACCCCGA CATCCACTTG GGACCAGGAT ACAAATGGGA GGAAGGGGAT
AACCGGTGGG GGCTTGGCCT TACCATCACC CTCCCCATCC TGAATCAAAA CCAGGGCCCC
ATCGCTGCGG CCAAGGGACA GGTAGCCGCG GCGGCTGCCA CCTTCACCGC CCTGCAGGCC
CGGGTGATCG GGCAGGTCAG CCAGTCCGCC GTGGGTTATC GCGGCGCTTT GCGAACACTC
CAGGCGGCCC AGGCCCTGCT TGAAGTTCAA CGAAAGAACC AGCGGTTGCT TGAGCGGCGT
TACGCCTCTG GTGAAGCGGG CTCTCTCGCC TTGCTTGGGG GACACCTTGC GTACCTCGTG
GCCGCACGCG ATCGGCTCAT TGCCTTGTAT CAGGCGCAAC AAGCTCTGGG TGTGCTGGAA
AATGCGGTAC AGCAGCCTAT GGCCCCCGTT CCCTACGGGA AAGAACTCTT ATCCGGCCAT
GCACGGGGGC ACTCATGA
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| Protein sequence | MGASGGAEKA ATGKAIRRPQ RPVLAFFLLS LLSACATYHP QPLSPERSAA AFQARSLDDP
KLRVFLSDYG RTPKHWPKQH WNLDDLVLVA LYESPELAVQ RARWQVARAN VVTAGQRPNP
SIGFLSQHHS IAPEGVLPWT LGFSFDIPIE TAGKRGDRVQ GALALADAAR FQVGESAWQV
RALVRQRFLD LFAAIEQINV LKAETAVRRR MLKLVEQRFA AGESSAFAVN IIQLDWQRTQ
MALATAEAHA ASARAALAQA LGLPVGAIAV LRFDFTDMNQ PLAGKYPPLA TLERAALRHR
LDLRADLARY AAAEDTLKLE IAKQYPDIHL GPGYKWEEGD NRWGLGLTIT LPILNQNQGP
IAAAKGQVAA AAATFTALQA RVIGQVSQSA VGYRGALRTL QAAQALLEVQ RKNQRLLERR
YASGEAGSLA LLGGHLAYLV AARDRLIALY QAQQALGVLE NAVQQPMAPV PYGKELLSGH
ARGHS
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