Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0183 |
Symbol | |
ID | 6876133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 171700 |
End bp | 174798 |
Gene Length | 3099 bp |
Protein Length | 1032 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788060 |
Product | acriflavin resistance protein |
Protein accession | YP_002218649 |
Protein GI | 198282328 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAG CCATCATTCG CTTCTCCATC CGCTTTCGCG GGGTGATCCT TGCCCTGGCG CTTTTAGTGG CCGGTTATGG CCTCTATACC CTTTCCCAGG TGAAGCTGGA CGCCTTCCCC AGTTTCACGC CGCCGCTCGT AACCCTGGTA ACGGAAGCCC CGGGCCTGTC GCCCGAGCAA GTGGCGGCCC TGGTCACCCA ACCTATCCAG AACGCACTAT CCGGGACAGC CGGTTTGCAG GCCATGCGTT CGCGGTCCAT CCAAGGCCTG TCGGTGATCA CCTTGACGTT CCACAATGGG ACGGACATTT TCCGGGACCG CCAGATCGTG GCCGAACGGT TGAACACCGT CGCCGGACAG TTGCCGCTCG GGGTGCGCGC GCCTTTCCTG ACCCCCCTGA CGTCGGCAAC GGGCGTCGTC CAGGTGCTGG GCCTTACGTC GGATACCCGC TCGCTCATGA CCCTGCGTAC CTTGGCCGAT TGGCTGCTCA AGCCGCAGTT GCTGAGCATC CCCGGCGTGG CCAATGTCGC CATCTACGGG GGGCAGGTGC GCGAACTGCA GATCCAGGTG CAACCGGAAA AGCTGGTACG GTTTGGATTG TCGTTCCAGG ATGTCGTCCG TGCCACGCAG CGGGCCACCG GGGTACGAGG GGCTGGTTTC CTGGAGGATG TCAACCAAAG GATCGCCATC CGTACCGAGG GCCAAAGCAT CACTGCCGCC CAGTTGGCGA ACGTGGTCAT CCTGCGCCGC CAGGGCGCGG ATCTCCGTTT GGGCGATGTG GCGCAGGTGG TGGCGGCGCC GGCGCCGGCC ATCGGCGGTG CCACCATAGA GGGTAAGCCG GGGGTCATCC TCAACGTCGA GGAGCAATAC GGTGCCAATA CCCTGGCGGT GACCAGGGCA TTGAAGGATC GGCTCCAACA GCTTGGCCCA GTGCTGGCGG CGCAAGGAGT GTCCCTGCAT CCCGATCTTT TCGGGCAAGC CAGTTACATA GAAACCGCCA TTGCCCACCT GCGCACGGCG CTGCTGGTAG GAGCCATTCT GGTCATTACC GTGCTCTTTC TTTTTCTATT CAATGCGCGC ACCGCCTTGA TATCGGCGAC TGCCATCCCC CTTTCGCTGC TTACCGCGAT CATCGTTCTC AATGCGCTCG GCGCCAGCAT CAATACCATG ACCTTGGGTG GACTCGCCAT CGCCATCGGC GAAGTGGTGG ACGACGCCAT CATCGACGTC GAGAACATCT TTCGGCGCCT GCGGGAAAAC CGCGCCCGAG CACAGCCCTC ATCCATCGCG AAAGTGGTGC TCGCTAGCTC CCTGGAGGTG CGCGGGGCGG TGACGTATGC CACCTTTATC GTGGCCTTGG TCTTCGTGCC GGTGCTGTCG CTCTCCGGAG TGGCCGGCAA ACTCTTCGCG CCGCTGGGCG AAGCGTATAT CGCGGCCGTG TTCGCCTCCT TGGCGGTGGC GCTGACCGTG ACCCCTGCCC TGGCTTATCT ACTGCTGGGG CGCACACAAC CCCGCCCGCT GGATCCTGCC TGGCTCTGCA AGCTCAAGGA GGTCCAGGCA CGGCTGCTTA CTCGCGCCGA GCGCCACAGC CGCTTGCTGA TCGTGGGGAT TATGTTACTG TTCCTGGCGG CGATGGCCGT CTTGCAGTCG TTCGGAAGCA ATTTCCTCCC GGAATTCAGG GAACGGCATT TCATCGTGCA TGTATCCACC GAACCGGGGA CCTCGCTTGC CGAGTCGATA CAGCTTGGGC GTCACATTTC CACGGCCCTG AGCCGCATCC CCGCCATCCG CTCGGTGGCG CAGCGGGTGG GACGGGCGGA GAGGACGGGT ACGGATACTT ACGGCGTCAA CGTGAGCGAA TTTATCGTCG GCCTCAAACC CCTTTCCGGG CATGCACAAG AGCAGGTCCT GGCCCGGATC CGCAAAACCC TGTCGGGGTT TCCAGGGGTG AACTCCTCCG TCGAGACGCC TTTGTCGGAC CGTATTGAAG AGACGATCTC CGGTTACACC GCACCGGTGG TGGTCAGCGT CTTTGGCACG AATTTCAATC TGCTTTATGA AAAAGCGCGG GAAATCGCCT CAGTTCTCGA GCAGTTACCC GGCGCAGTAG ACGTGCAGAT GCACGCCCCT CCAAGTGCGC CGCAACTGAC CATTCGCCTT CGACGGACGG CGTTGGCCCG TTGGGGATTC GAGCCGGTGG ATGTACTCGA CGCGATCCAG ACCGCCTATG CGGGCAGCAT CGTTGCGCAA ACCTACCAAG GGAACCGCGT GTTCAATGTG GTAGTCACAT TGGATACTGC TGAGCGGCGG AATCCAGCGC AGGTGGGCAA TCTGCCCTTG CGCAATCCCA ATGGATTGAT GGTCCCCCTG CGGGATTTGG CCGATATTTA CGAAGGCGTT GGACCCTATG CCATTCTCGA AACCGCAGGG CAGCCCGTGC AGACCGTCAC CGCGGCCGTT CATGGTCAGG CGTTGAGCGA GTTCGTGCAT GCGGCCGAAC ACCGGATCCA CAAGGATATT TCTTTCCCCC CTGGAACCTA TGTAGTGTTT TCTGGCGCCG CGGAGGCACA GGCGAAAGCG CAAAGCGAAC TGCTCATGCA TGCGCTGATG GCGGGAGTGG GTATTGTTCT CCTGCTCTTC ATCGCCCTGC GCCGCGCGCG CGCCTTGTTC CTGGTACTGC TCAATCTGCC CTTCGCCCTG ATCGGCGGGG TAACCGCCGT GCTGCTTACC GGCAGCGTGC TGTCCCTCGG TTCGCTGGTG GGCTTCGTGA CCATCTTCGG CATCACCTTG CGCAATTCCA TCATGCTGAT TTCCCATTAC CAGCATCTGG TTGAGGTGGA AGGCATGTCT TGGGGGCGGG AGGCGGCGAT TCGCGGCGCC CAGGAGCGGC TGGTACCCAT TCTCATGACG GCCTTGGTCA CGGCCTTGGG CCTGCTGCCC TTGGCGCTCA CCAGCGGGGC GCCGGGCAAC GAGATCGAAG GACCCATGGC ACAGGTCATC CTCGGCGGCC TGATCACCTC TACCGCCTTG AACCTGCTGG TGCTGCCCAT TATGGCTTTA CGCTTCGGGC GCTTCGTCCC GGTCGACCGT TATGACTGA
|
Protein sequence | MLKAIIRFSI RFRGVILALA LLVAGYGLYT LSQVKLDAFP SFTPPLVTLV TEAPGLSPEQ VAALVTQPIQ NALSGTAGLQ AMRSRSIQGL SVITLTFHNG TDIFRDRQIV AERLNTVAGQ LPLGVRAPFL TPLTSATGVV QVLGLTSDTR SLMTLRTLAD WLLKPQLLSI PGVANVAIYG GQVRELQIQV QPEKLVRFGL SFQDVVRATQ RATGVRGAGF LEDVNQRIAI RTEGQSITAA QLANVVILRR QGADLRLGDV AQVVAAPAPA IGGATIEGKP GVILNVEEQY GANTLAVTRA LKDRLQQLGP VLAAQGVSLH PDLFGQASYI ETAIAHLRTA LLVGAILVIT VLFLFLFNAR TALISATAIP LSLLTAIIVL NALGASINTM TLGGLAIAIG EVVDDAIIDV ENIFRRLREN RARAQPSSIA KVVLASSLEV RGAVTYATFI VALVFVPVLS LSGVAGKLFA PLGEAYIAAV FASLAVALTV TPALAYLLLG RTQPRPLDPA WLCKLKEVQA RLLTRAERHS RLLIVGIMLL FLAAMAVLQS FGSNFLPEFR ERHFIVHVST EPGTSLAESI QLGRHISTAL SRIPAIRSVA QRVGRAERTG TDTYGVNVSE FIVGLKPLSG HAQEQVLARI RKTLSGFPGV NSSVETPLSD RIEETISGYT APVVVSVFGT NFNLLYEKAR EIASVLEQLP GAVDVQMHAP PSAPQLTIRL RRTALARWGF EPVDVLDAIQ TAYAGSIVAQ TYQGNRVFNV VVTLDTAERR NPAQVGNLPL RNPNGLMVPL RDLADIYEGV GPYAILETAG QPVQTVTAAV HGQALSEFVH AAEHRIHKDI SFPPGTYVVF SGAAEAQAKA QSELLMHALM AGVGIVLLLF IALRRARALF LVLLNLPFAL IGGVTAVLLT GSVLSLGSLV GFVTIFGITL RNSIMLISHY QHLVEVEGMS WGREAAIRGA QERLVPILMT ALVTALGLLP LALTSGAPGN EIEGPMAQVI LGGLITSTAL NLLVLPIMAL RFGRFVPVDR YD
|
| |